Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 24751 |
SRR953582_primary_scf7180002164476_894-2106
Len: 1,212 bp
E-val: 3.4E-47
|
RXN17338.1sonic hedgehog
Acting on peptide bonds (peptidases); Transferases
|
GO:0001756P:somitogenesis GO:0001839P:neural plate morphogenesis GO:0001947P:heart looping GO:0007267P:cell-cell signaling GO:0007411P:axon guidance GO:0008015P:blood circulation GO:0008285P:negative regulation of cell population proliferation GO:0009953P:dorsal/ventral pattern formation GO:0010002P:cardioblast differentiation GO:0010468P:regulation of gene expression GO:0016539P:intein-mediated protein splicing GO:0016540P:protein autoprocessing GO:0021508P:floor plate formation GO:0021520P:spinal cord motor neuron cell fate specification GO:0021984P:adenohypophysis development GO:0021986P:habenula development GO:0030510P:regulation of BMP signaling pathway GO:0030902P:hindbrain development GO:0030917P:midbrain-hindbrain boundary development GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0031018P:endocrine pancreas development GO:0031076P:embryonic camera-type eye development GO:0032835P:glomerulus development GO:0033339P:pectoral fin development GO:0035143P:caudal fin morphogenesis GO:0042462P:eye photoreceptor cell development GO:0042476P:odontogenesis GO:0042694P:muscle cell fate specification GO:0045494P:photoreceptor cell maintenance GO:0045880P:positive regulation of smoothened signaling pathway GO:0048557P:embryonic digestive tract morphogenesis GO:0048618P:post-embryonic foregut morphogenesis GO:0048702P:embryonic neurocranium morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0048709P:oligodendrocyte differentiation GO:0048741P:skeletal muscle fiber development GO:0048793P:pronephros development GO:0048795P:swim bladder morphogenesis GO:0048839P:inner ear development GO:0060956P:endocardial cell differentiation GO:0061035P:regulation of cartilage development GO:0070444P:oligodendrocyte progenitor proliferation GO:0097264P:self proteolysis GO:1905178P:regulation of cardiac muscle tissue regeneration GO:0005113F:patched binding GO:0005509F:calcium ion binding GO:0008233F:peptidase activity GO:0140853F:cholesterol-protein transferase activity GO:0000139C:Golgi membrane GO:0005615C:extracellular space GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
EC:EC:3.4 EC:EC:2 |
| 24752 |
SRR953582_primary_scf7180002164483_1-298
Len: 297 bp
E-val: 9.2E-39
|
KTG31205.1hypothetical protein cypCar_00019065
|
GO:0034472P:snRNA 3'-end processing GO:0032039C:integrator complex |
- |
| 24753 |
SRR953582_primary_scf7180002164483_1210-1909
Len: 699 bp
E-val: 4.1E-29
|
XP_018947411.1PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
Lyases
|
GO:0006633P:fatty acid biosynthetic process GO:0016829F:lyase activity GO:0110165C:cellular anatomical structure |
EC:EC:4 |
| 24754 |
SRR953582_primary_scf7180002164525_814-2792
Len: 1,978 bp
E-val: 1.7E-16
|
RXN03089.1dnaJ -like protein
|
GO:0006355P:regulation of DNA-templated transcription GO:0042407P:cristae formation GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005739C:mitochondrion GO:0016020C:membrane |
- |
| 24755 |
SRR953582_primary_scf7180002164538_1-1729
Len: 1,728 bp
E-val: 3.1E-46
|
KTF85169.1hypothetical protein cypCar_00043478
protein S-acyltransferase
|
GO:0006612P:protein targeting to membrane GO:0019706F:protein-cysteine S-palmitoyltransferase activity GO:0140439F:protein-cysteine S-stearoyltransferase activity GO:0005789C:endoplasmic reticulum membrane GO:0005794C:Golgi apparatus |
EC:EC:2.3.1.225 |
| 24756 |
SRR953582_primary_scf7180002164574_1-1987
Len: 1,986 bp
E-val: 1.4E-37
|
BAE46430.1reverse transcriptase
|
GO:0004104F:cholinesterase activity GO:0016787F:hydrolase activity |
- |
| 24757 |
SRR953582_primary_scf7180002164576_1-3461
Len: 3,460 bp
E-val: 1.4E-45
|
RXN36304.1putative vertebrate spectrin repeat nuclear envelope 1 (SYNE1)
|
GO:0110165C:cellular anatomical structure |
- |
| 24758 |
SRR953582_primary_scf7180002164581_1-1421
Len: 1,420 bp
E-val: 4.4E-30
|
XP_016092458.1PREDICTED: transcriptional coactivator YAP1
|
GO:0001570P:vasculogenesis GO:0001889P:liver development GO:0003173P:ventriculo bulbo valve development GO:0003406P:retinal pigment epithelium development GO:0007155P:cell adhesion GO:0007420P:brain development GO:0007492P:endoderm development GO:0009950P:dorsal/ventral axis specification GO:0010629P:negative regulation of gene expression GO:0030509P:BMP signaling pathway GO:0031016P:pancreas development GO:0031101P:fin regeneration GO:0035162P:embryonic hemopoiesis GO:0035329P:hippo signaling GO:0039022P:pronephric duct development GO:0042593P:glucose homeostasis GO:0043066P:negative regulation of apoptotic process GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046620P:regulation of organ growth GO:0048566P:embryonic digestive tract development GO:0048916P:posterior lateral line development GO:0051216P:cartilage development GO:0060271P:cilium assembly GO:0060914P:heart formation GO:0061371P:determination of heart left/right asymmetry GO:0070121P:Kupffer's vesicle development GO:1905590P:fibronectin fibril organization GO:0003713F:transcription coactivator activity GO:0000785C:chromatin GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005923C:bicellular tight junction |
- |
| 24759 |
SRR953582_primary_scf7180002164608_559-1989
Len: 1,430 bp
E-val: 3.3E-110
|
KTG47471.1hypothetical protein cypCar_00023126
Acting on peptide bonds (peptidases)
|
EC:EC:3.4 | |
| 24760 |
SRR953582_primary_scf7180002164610_1-1915
Len: 1,914 bp
E-val: 2.1E-43
|
XP_018954083.1PREDICTED: LOW QUALITY PROTEIN: type I inositol 3,4-bisphosphate 4-phosphatase-like
Hydrolases
|
GO:0044238P:primary metabolic process GO:0016787F:hydrolase activity |
EC:EC:3 |
| 24761 |
SRR953582_primary_scf7180002164655_901-2715
Len: 1,814 bp
E-val: 1.9E-14
|
CDQ83362.1unnamed protein product
|
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0048268P:clathrin coat assembly GO:0072583P:clathrin-dependent endocytosis GO:0000149F:SNARE binding GO:0005545F:1-phosphatidylinositol binding GO:0005546F:phosphatidylinositol-4,5-bisphosphate binding GO:0032050F:clathrin heavy chain binding GO:0005905C:clathrin-coated pit GO:0008021C:synaptic vesicle GO:0030136C:clathrin-coated vesicle GO:0098894C:extrinsic component of presynaptic endocytic zone membrane |
- |
| 24762 |
SRR953582_primary_scf7180002164678_1-1563
Len: 1,562 bp
E-val: 1.1E-37
|
XP_018966066.1PREDICTED: laminin subunit beta-3-like isoform X1
|
GO:0007411P:axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0016477P:cell migration GO:0034446P:substrate adhesion-dependent cell spreading GO:0070831P:basement membrane assembly GO:0043256C:laminin complex |
- |
| 24763 |
SRR953582_primary_scf7180002164690_964-2360
Len: 1,396 bp
E-val: 4.0E-36
|
XP_018971937.1PREDICTED: zinc finger and BTB domain-containing protein 47-like isoform X1
Acting on ester bonds
|
GO:0007165P:signal transduction GO:0035630P:bone mineralization involved in bone maturation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016791F:phosphatase activity GO:0005634C:nucleus |
EC:EC:3.1.3 |
| 24764 |
SRR953582_primary_scf7180002164693_1-2015
Len: 2,014 bp
E-val: 3.0E-32
|
XP_016085625.1PREDICTED: insulin-degrading enzyme-like isoform X1
|
GO:0009987P:cellular process |
- |
| 24765 |
SRR953582_primary_scf7180002164704_648-2084
Len: 1,436 bp
E-val: 6.7E-18
|
XP_016342565.1PREDICTED: TCF3 fusion partner-like
|
GO:0009987P:cellular process GO:0005739C:mitochondrion GO:0005840C:ribosome GO:0070013C:intracellular organelle lumen GO:1990904C:ribonucleoprotein complex |
- |
| 24766 |
SRR953582_primary_scf7180002164713_1008-1532
Len: 524 bp
E-val: 5.1E-85
|
XP_018960253.1PREDICTED: protein shisa-1-like
|
GO:0016020C:membrane |
- |
| 24767 |
SRR953582_primary_scf7180002164714_1-1974
Len: 1,973 bp
E-val: 1.6E-41
|
XP_016406989.1PREDICTED: C-type mannose receptor 2-like, partial
|
GO:0006897P:endocytosis GO:0030246F:carbohydrate binding GO:0038023F:signaling receptor activity GO:0016020C:membrane |
- |
| 24768 |
SRR953582_primary_scf7180002164718_788-2086
Len: 1,298 bp
E-val: 5.8E-21
|
XP_016350704.1PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like isoform X7
Transferring phosphorus-containing groups
|
GO:0006020P:inositol metabolic process GO:0032958P:inositol phosphate biosynthetic process GO:0000832F:inositol hexakisphosphate 5-kinase activity GO:0005524F:ATP binding GO:0033857F:5-diphosphoinositol pentakisphosphate 1-kinase activity GO:0052723F:inositol hexakisphosphate 1-kinase activity GO:0005829C:cytosol GO:0005886C:plasma membrane |
EC:EC:2.7.4 |
| 24769 |
SRR953582_primary_scf7180002164737_1193-2286
Len: 1,093 bp
E-val: 1.4E-47
|
XP_018974682.1PREDICTED: ELL-associated factor 1-like
|
- | |
| 24770 |
SRR953582_primary_scf7180002164738_1700-2605
Len: 905 bp
E-val: 3.9E-16
|
ROK28200.1Amyloid protein-binding protein 2
|
GO:0006886P:intracellular protein transport GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:1990756F:ubiquitin-like ligase-substrate adaptor activity GO:0031462C:Cul2-RING ubiquitin ligase complex |
- |
| 24771 |
SRR953582_primary_scf7180002164743_1-2168
Len: 2,167 bp
E-val: 1.7E-17
|
ROL43310.1Copine-2
|
GO:0071277P:cellular response to calcium ion GO:0005544F:calcium-dependent phospholipid binding GO:0005886C:plasma membrane |
- |
| 24772 |
SRR953582_primary_scf7180002164766_1-1543
Len: 1,542 bp
E-val: 1.0E-64
|
XP_018942068.1PREDICTED: transforming growth factor-beta-induced protein ig-h3
|
GO:0009987P:cellular process |
- |
| 24773 |
SRR953582_primary_scf7180002164770_1-2556
Len: 2,555 bp
E-val: 4.7E-22
|
XP_016117961.1PREDICTED: E3 ubiquitin-protein ligase HECW1-like, partial
|
GO:0003824F:catalytic activity |
- |
| 24774 |
SRR953582_primary_scf7180002164789_2581-2793
Len: 212 bp
E-val: 3.2E-30
|
XP_026097499.1voltage-gated potassium channel subunit beta-2-like isoform X1
Oxidoreductases
|
GO:0051969P:regulation of transmission of nerve impulse GO:0098900P:regulation of action potential GO:1901379P:regulation of potassium ion transmembrane transport GO:0005249F:voltage-gated potassium channel activity GO:0015459F:potassium channel regulator activity GO:0016491F:oxidoreductase activity GO:0044325F:transmembrane transporter binding GO:0005737C:cytoplasm GO:0008076C:voltage-gated potassium channel complex GO:0044224C:juxtaparanode region of axon |
EC:EC:1 |
| 24775 |
SRR953582_primary_scf7180002164796_1-670
Len: 669 bp
E-val: 6.7E-37
|
XP_026085271.1zinc finger protein 106-like isoform X1
|
GO:0008286P:insulin receptor signaling pathway GO:0003723F:RNA binding GO:0017124F:SH3 domain binding GO:0005829C:cytosol GO:0016020C:membrane |
- |