Gene Function: DNA Metabolism

Functional and statistical data for significant genes

Download
Showing 1,023 results (Page 19 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002096031_1-414
Len: 413 bp
Hits: 20
E-val: 4.50E-28
Sim: 99.6%
 XP_026140185.1ankyrin repeat and IBR domain-containing protein 1-like isoform X1
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002096745_184-1855
Len: 1,671 bp
Hits: 20
E-val: 1.50E-66
Sim: 59.96%
 XP_018949979.1 villin-1-like
GO:0016043P:cellular component organization
GO:0050794P:regulation of cellular process
GO:0005488F:binding
GO:0008420F:RNA polymerase II CTD heptapeptide repeat phosphatase activity
DNA Metabolism
SRR941867_primary_scf7180002099324_1-1829
Len: 1,828 bp
Hits: 20
E-val: 4.40E-22
Sim: 93.84%
 XP_016121134.1 RING finger protein 145-like
GO:0036503P:ERAD pathway
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0012505C:endomembrane system
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002099624_330-1861
Len: 1,531 bp
Hits: 20
E-val: 4.70E-86
Sim: 76.77%
 RXN13491.1zinc finger BED domain-containing 4-like protein
GO:0009791P:post-embryonic development
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002100019_308-1363
Len: 1,055 bp
Hits: 20
E-val: 6.80E-52
Sim: 75.61%
 XP_026132086.1helicase SRCAP-like isoform X1
GO:0006338P:chromatin remodeling
GO:0016887F:ATP hydrolysis activity
GO:0042393F:histone binding
GO:0000812C:Swr1 complex
DNA Metabolism
SRR941867_primary_scf7180002100457_1-1456
Len: 1,455 bp
Hits: 20
E-val: 1.40E-52
Sim: 56.54%
 ROL47384.1putative E3 ubiquitin-protein ligase HERC1
GO:0004842F:ubiquitin-protein transferase activity
GO:0016874F:ligase activity
DNA Metabolism
SRR941867_primary_scf7180002101232_1-1684
Len: 1,683 bp
Hits: 20
E-val: 1.50E-29
Sim: 91.51%
 XP_018981485.1 LOW QUALITY PROTEIN: zona pellucida sperm-binding protein 2-like
GO:0003677F:DNA binding
GO:0005576C:extracellular region
GO:0005634C:nucleus
GO:0005886C:plasma membrane
DNA Metabolism
SRR941867_primary_scf7180002103585_269-1411
Len: 1,142 bp
Hits: 20
E-val: 3.50E-195
Sim: 87.81%
 XP_018965058.1 putative nuclease HARBI1 isoform X1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002104271_1-2390
Len: 2,389 bp
Hits: 20
E-val: 9.70E-22
Sim: 91.78%
 WP_071414397.1reverse transcriptase family protein
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0003964F:RNA-directed DNA polymerase activity
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002106046_813-1356
Len: 543 bp
Hits: 20
E-val: 2.30E-35
Sim: 68.83%
 XP_016376726.1 putative nuclease HARBI1, partial
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002106850_1-1336
Len: 1,335 bp
Hits: 20
E-val: 1.10E-17
Sim: 97.95%
 NP_001314771.1ankyrin repeat and BTB/POZ domain-containing protein BTBD11-A isoform 1
GO:0003677F:DNA binding
GO:0030527F:structural constituent of chromatin
GO:0046982F:protein heterodimerization activity
GO:0000786C:nucleosome
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002107309_1-913
Len: 912 bp
Hits: 20
E-val: 5.30E-29
Sim: 98.67%
 XP_018955590.1 LOW QUALITY PROTEIN: ubiquitin-associated domain-containing protein 1-like
GO:0016567P:protein ubiquitination
GO:0051604P:protein maturation
GO:0003677F:DNA binding
GO:0031593F:polyubiquitin modification-dependent protein binding
GO:0070628F:proteasome binding
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002108514_1280-1586
Len: 306 bp
Hits: 20
E-val: 1.70E-08
Sim: 95.25%
 XP_006637549.1 E3 ubiquitin-protein ligase RNF13 isoform X2
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0012505C:endomembrane system
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002110703_1-1994
Len: 1,993 bp
Hits: 20
E-val: 2.50E-15
Sim: 100%
 NP_997975.2structural maintenance of chromosomes 1A, like
GO:0006281P:DNA repair
GO:0006313P:DNA transposition
GO:0007062P:sister chromatid cohesion
GO:0015074P:DNA integration
GO:0048703P:embryonic viscerocranium morphogenesis
GO:0051301P:cell division
GO:0003677F:DNA binding
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
GO:0005634C:nucleus
GO:0030893C:meiotic cohesin complex
DNA Metabolism
SRR941867_primary_scf7180002111322_790-1203
Len: 413 bp
Hits: 17
E-val: 4.20E-58
Sim: 71.65%
 ROL53945.1Pogo transposable element with KRAB domain
GO:0030199P:collagen fibril organization
GO:0003677F:DNA binding
GO:0005518F:collagen binding
GO:0005634C:nucleus
GO:0005783C:endoplasmic reticulum
DNA Metabolism
SRR941867_primary_scf7180002114166_1-1284
Len: 1,283 bp
Hits: 20
E-val: 4.40E-53
Sim: 78.66%
 XP_018948380.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
GO:0003723F:RNA binding
GO:0004386F:helicase activity
GO:0005681C:spliceosomal complex
DNA Metabolism
SRR941867_primary_scf7180002114883_199-1280
Len: 1,081 bp
Hits: 20
E-val: 1.90E-121
Sim: 96.46%
 XP_018962706.1 putative nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002119966_1-1355
Len: 1,354 bp
Hits: 20
E-val: 6.40E-164
Sim: 78.25%
 XP_017341366.1 zinc finger BED domain-containing protein 1-like
GO:0016874F:ligase activity
GO:0046983F:protein dimerization activity
DNA Metabolism
SRR941867_primary_scf7180002123076_1-1333
Len: 1,332 bp
Hits: 20
E-val: 1.30E-31
Sim: 98%
 RXN08829.1JNK1 MAPK8-associated membrane -like protein
GO:0006986P:response to unfolded protein
GO:0036503P:ERAD pathway
GO:0031625F:ubiquitin protein ligase binding
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002148221_1284-1520
Len: 236 bp
Hits: 20
E-val: 3.10E-21
Sim: 83.29%
 XP_016093523.1 neurexin-3b-like
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002148883_183-617
Len: 434 bp
Hits: 20
E-val: 9.50E-69
Sim: 84.67%
 ROL54938.1LINE-1 retrotransposable element ORF2 protein
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0003964F:RNA-directed DNA polymerase activity
DNA Metabolism
SRR941867_primary_scf7180002149466_1418-3077
Len: 1,659 bp
Hits: 20
E-val: 2.90E-41
Sim: 51.42%
 RXN07205.1growth arrest and DNA damage-inducible GADD45 alpha-like protein
GO:0006974P:DNA damage response
GO:0051726P:regulation of cell cycle
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002151053_1-1384
Len: 1,383 bp
Hits: 20
E-val: 1.20E-16
Sim: 96.3%
 ROL51216.1DNA damage-binding protein 1
GO:0006281P:DNA repair
GO:0016567P:protein ubiquitination
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0003676F:nucleic acid binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002151535_236-1021
Len: 785 bp
Hits: 20
E-val: 4.80E-135
Sim: 97%
 XP_018927284.1 RING finger protein 208
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
DNA Metabolism
SRR941867_primary_scf7180002152104_1-1042
Len: 1,041 bp
Hits: 20
E-val: 1.10E-25
Sim: 98.99%
 XP_026050879.1E3 ubiquitin-protein ligase SH3RF1-like
GO:0016567P:protein ubiquitination
GO:0032436P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043066P:negative regulation of apoptotic process
GO:0046330P:positive regulation of JNK cascade
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005794C:Golgi apparatus
GO:0030027C:lamellipodium
GO:0048471C:perinuclear region of cytoplasm
DNA Metabolism