Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002168841_573-1990
Len: 1,417 bp
Hits: 20
E-val: 4.80E-61
Sim: 94.88%
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XP_026107463.1lamin-A-like |
GO:0006998P:nuclear envelope organization GO:0007010P:cytoskeleton organization GO:0007097P:nuclear migration GO:0031507P:heterochromatin formation GO:0051664P:nuclear pore localization GO:0090435P:protein localization to nuclear envelope GO:0005200F:structural constituent of cytoskeleton GO:0005652C:nuclear lamina GO:0005654C:nucleoplasm GO:0005882C:intermediate filament GO:0016363C:nuclear matrix |
DNA Metabolism
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SRR941867_primary_scf7180002169289_205-1308
Len: 1,103 bp
Hits: 20
E-val: 1.00E-130
Sim: 84.26%
|
XP_026123368.1chromodomain-helicase-DNA-binding protein 9-like isoform X2 |
GO:0006325P:chromatin organization GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus |
DNA Metabolism
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SRR941867_primary_scf7180002169314_1-1503
Len: 1,502 bp
Hits: 20
E-val: 3.70E-35
Sim: 69.59%
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XP_016139487.1 structural maintenance of chromosomes protein 6-like |
GO:0000724P:double-strand break repair via homologous recombination GO:0003684F:damaged DNA binding GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0000781C:chromosome, telomeric region GO:0005634C:nucleus GO:0030915C:Smc5-Smc6 complex GO:0035861C:site of double-strand break |
DNA Metabolism
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SRR941867_primary_scf7180002170621_53-1256
Len: 1,203 bp
Hits: 20
E-val: 1.60E-36
Sim: 87.55%
|
XP_018928490.1 E3 ubiquitin-protein ligase UBR3-like |
GO:0016567P:protein ubiquitination GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002172347_1-1237
Len: 1,236 bp
Hits: 20
E-val: 6.10E-20
Sim: 88.26%
|
XP_003975439.1 receptor-type tyrosine-protein phosphatase F isoform X1 |
GO:0006338P:chromatin remodeling GO:0007155P:cell adhesion GO:0097374P:sensory neuron axon guidance GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0008201F:heparin binding GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002172447_1-1360
Len: 1,359 bp
Hits: 20
E-val: 4.30E-59
Sim: 55.75%
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XP_016106854.1 E1A-binding protein p400-like |
GO:0006281P:DNA repair GO:0006325P:chromatin organization GO:0003682F:chromatin binding GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0000812C:Swr1 complex GO:0005634C:nucleus GO:0005654C:nucleoplasm GO:0035267C:NuA4 histone acetyltransferase complex |
DNA Metabolism
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SRR941867_primary_scf7180002172730_45-1387
Len: 1,342 bp
Hits: 20
E-val: 4.80E-143
Sim: 75.36%
|
XP_018953326.1 LOW QUALITY PROTEIN: protein artemis-like |
GO:0000723P:telomere maintenance GO:0006303P:double-strand break repair via nonhomologous end joining GO:0006310P:DNA recombination GO:0036297P:interstrand cross-link repair GO:0003684F:damaged DNA binding GO:0004519F:endonuclease activity GO:0035312F:5'-3' DNA exonuclease activity GO:0005634C:nucleus GO:0070419C:nonhomologous end joining complex |
DNA Metabolism
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SRR941867_primary_scf7180002173764_1-1081
Len: 1,080 bp
Hits: 20
E-val: 9.80E-30
Sim: 97.26%
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XP_001342996.2protein ABHD17A |
GO:0010890P:positive regulation of triglyceride storage GO:0098734P:macromolecule depalmitoylation GO:0099175P:regulation of postsynapse organization GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0008474F:palmitoyl-(protein) hydrolase activity GO:0005811C:lipid droplet GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0010008C:endosome membrane |
DNA Metabolism
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SRR941867_primary_scf7180002175910_1-1367
Len: 1,366 bp
Hits: 18
E-val: 1.30E-15
Sim: 92.46%
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XP_016100509.1 structural maintenance of chromosomes protein 6-like |
GO:0000724P:double-strand break repair via homologous recombination GO:0003684F:damaged DNA binding GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0000781C:chromosome, telomeric region GO:0005634C:nucleus GO:0030915C:Smc5-Smc6 complex GO:0035861C:site of double-strand break |
DNA Metabolism
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SRR941867_primary_scf7180002176904_278-1864
Len: 1,586 bp
Hits: 20
E-val: 2.60E-31
Sim: 63.96%
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XP_026076470.1microspherule protein 1-like isoform X2 |
GO:0010842P:retina layer formation GO:0060271P:cilium assembly GO:0000785C:chromatin GO:1990234C:transferase complex |
DNA Metabolism
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SRR941867_primary_scf7180002177446_1-1139
Len: 1,138 bp
Hits: 20
E-val: 6.90E-18
Sim: 92.94%
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XP_022541288.1receptor-type tyrosine-protein phosphatase kappa-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002177538_1-1361
Len: 1,360 bp
Hits: 20
E-val: 4.40E-35
Sim: 61.53%
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XP_018919116.1 histone PARylation factor 1 isoform X1 |
DNA Metabolism
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SRR941867_primary_scf7180002178311_1-1007
Len: 1,006 bp
Hits: 20
E-val: 3.30E-24
Sim: 100%
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XP_016140576.1 protein RMD5 homolog B-like |
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0034657C:GID complex |
DNA Metabolism
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SRR941867_primary_scf7180002178586_213-1202
Len: 989 bp
Hits: 20
E-val: 4.70E-39
Sim: 98.73%
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XP_016103755.1 receptor-type tyrosine-protein phosphatase S-like |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002179269_1-1044
Len: 1,043 bp
Hits: 20
E-val: 4.80E-18
Sim: 99.72%
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XP_015471835.1 regulator of nonsense transcripts 1 |
GO:0006281P:DNA repair GO:0006449P:regulation of translational termination GO:0032201P:telomere maintenance via semi-conservative replication GO:0032204P:regulation of telomere maintenance GO:0033077P:T cell differentiation in thymus GO:0043009P:chordate embryonic development GO:0044770P:cell cycle phase transition GO:0061158P:3'-UTR-mediated mRNA destabilization GO:0071044P:histone mRNA catabolic process GO:0071222P:cellular response to lipopolysaccharide GO:0071347P:cellular response to interleukin-1 GO:1905746P:positive regulation of mRNA cis splicing, via spliceosome GO:2000624P:positive regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0003682F:chromatin binding GO:0003723F:RNA binding GO:0003724F:RNA helicase activity GO:0005515F:protein binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0042162F:telomeric DNA binding GO:0044877F:protein-containing complex binding GO:0000781C:chromosome, telomeric region GO:0000785C:chromatin GO:0000932C:P-body GO:0005654C:nucleoplasm GO:0005829C:cytosol GO:0035145C:exon-exon junction complex GO:0044530C:supraspliceosomal complex GO:0048471C:perinuclear region of cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002180457_513-833
Len: 320 bp
Hits: 3
E-val: 3.60E-17
Sim: 97.39%
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XP_026119260.1estrogen-related receptor gamma-like |
GO:0033993P:response to lipid GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0042562F:hormone binding GO:0005634C:nucleus |
DNA Metabolism
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SRR941867_primary_scf7180002181242_1-914
Len: 913 bp
Hits: 20
E-val: 2.10E-70
Sim: 69.65%
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XP_018949802.1 tripartite motif-containing protein 2-like |
GO:0000209P:protein polyubiquitination GO:0030099P:myeloid cell differentiation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0060215P:primitive hemopoiesis GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
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SRR941867_primary_scf7180002181750_1-988
Len: 987 bp
Hits: 20
E-val: 4.10E-27
Sim: 90.98%
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RXN25862.1receptor-type tyrosine- phosphatase F isoform X1 |
GO:0006338P:chromatin remodeling GO:0007155P:cell adhesion GO:0010468P:regulation of gene expression GO:0048514P:blood vessel morphogenesis GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0008201F:heparin binding GO:0008270F:zinc ion binding GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0051864F:histone H3K36 demethylase activity GO:0140684F:histone H3K9me2/H3K9me3 demethylase activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0000785C:chromatin GO:0005634C:nucleus GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002182719_1-1339
Len: 1,338 bp
Hits: 20
E-val: 9.70E-96
Sim: 85.68%
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RXN10421.1nuclease HARBI1 |
GO:0003676F:nucleic acid binding GO:0004518F:nuclease activity GO:0016787F:hydrolase activity GO:0046872F:metal ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
DNA Metabolism
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SRR941867_primary_scf7180002186667_1-850
Len: 849 bp
Hits: 20
E-val: 3.50E-115
Sim: 92.04%
|
XP_018924755.1 deubiquitinating protein VCIP135-like |
GO:0016320P:endoplasmic reticulum membrane fusion GO:0016567P:protein ubiquitination GO:0035871P:protein K11-linked deubiquitination GO:0071108P:protein K48-linked deubiquitination GO:0090168P:Golgi reassembly GO:0106300P:protein-DNA covalent cross-linking repair GO:1904888P:cranial skeletal system development GO:0004843F:cysteine-type deubiquitinase activity |
DNA Metabolism
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SRR941867_primary_scf7180002186773_1-1372
Len: 1,371 bp
Hits: 20
E-val: 1.60E-29
Sim: 98.46%
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XP_026098932.1TATA-binding protein-associated factor 172-like |
GO:0003677F:DNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0017025F:TBP-class protein binding GO:0005634C:nucleus GO:0012505C:endomembrane system GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002188019_1-1098
Len: 1,097 bp
Hits: 20
E-val: 1.40E-47
Sim: 79.16%
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ROI81838.1E3 ubiquitin-protein ligase BRE1B |
GO:0006325P:chromatin organization GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0033503C:HULC complex |
DNA Metabolism
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SRR941867_primary_scf7180002190601_1-1442
Len: 1,441 bp
Hits: 20
E-val: 1.30E-16
Sim: 97.52%
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XP_026055920.1MICOS complex subunit mic25a isoform X1 |
DNA Metabolism
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SRR941867_primary_scf7180002191567_1-844
Len: 843 bp
Hits: 20
E-val: 8.70E-18
Sim: 99.23%
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XP_026098782.1AN1-type zinc finger protein 5-like isoform X1 |
GO:0010890P:positive regulation of triglyceride storage GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005811C:lipid droplet GO:0005829C:cytosol |
DNA Metabolism
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SRR941867_primary_scf7180002192725_1-1198
Len: 1,197 bp
Hits: 20
E-val: 7.40E-55
Sim: 58.55%
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XP_026145182.1DDB1- and CUL4-associated factor 8-like |
DNA Metabolism
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