Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 22 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002194302_1-719
Len: 718 bp
Hits: 20
E-val: 8.20E-33
Sim: 97.65%
 XP_018919555.1 protein zer-1 homolog
GO:0048513P:animal organ development
GO:0031462C:Cul2-RING ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002194467_295-1681
Len: 1,386 bp
Hits: 20
E-val: 1.30E-29
Sim: 95.23%
 XP_018927166.1 tripartite motif-containing protein 54-like
GO:0030154P:cell differentiation
GO:0045087P:innate immune response
GO:0070507P:regulation of microtubule cytoskeleton organization
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0005874C:microtubule
GO:0030018C:Z disc
DNA Metabolism
SRR941867_primary_scf7180002194795_1-1089
Len: 1,088 bp
Hits: 20
E-val: 4.50E-91
Sim: 67.65%
 XP_018954949.1 tyrosyl-DNA phosphodiesterase 1-like isoform X1
GO:0006281P:DNA repair
GO:0008344P:adult locomotory behavior
GO:0003690F:double-stranded DNA binding
GO:0003697F:single-stranded DNA binding
GO:0004527F:exonuclease activity
GO:0017005F:3'-tyrosyl-DNA phosphodiesterase activity
GO:0090580F:phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002195308_133-1145
Len: 1,012 bp
Hits: 20
E-val: 5.20E-41
Sim: 50.34%
 RXN17531.1acetyl- carboxylase 1 isoform X1
GO:0006633P:fatty acid biosynthetic process
GO:2001295P:malonyl-CoA biosynthetic process
GO:0003989F:acetyl-CoA carboxylase activity
GO:0005524F:ATP binding
GO:0016874F:ligase activity
GO:0046872F:metal ion binding
GO:0005737C:cytoplasm
GO:0005739C:mitochondrion
DNA Metabolism
SRR941867_primary_scf7180002196425_1-1149
Len: 1,148 bp
Hits: 20
E-val: 1.20E-17
Sim: 99.55%
 XP_026090974.1LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC1
GO:0004842F:ubiquitin-protein transferase activity
GO:0016874F:ligase activity
DNA Metabolism
SRR941867_primary_scf7180002196535_1-540
Len: 539 bp
Hits: 20
E-val: 1.80E-16
Sim: 75.5%
 XP_026140185.1ankyrin repeat and IBR domain-containing protein 1-like isoform X1
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002196607_1-1106
Len: 1,105 bp
Hits: 20
E-val: 1.40E-20
Sim: 84.17%
 XP_016107592.1 E3 ubiquitin-protein ligase RNF5-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0036503P:ERAD pathway
GO:0008270F:zinc ion binding
GO:0044390F:ubiquitin-like protein conjugating enzyme binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005783C:endoplasmic reticulum
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002198281_1-968
Len: 967 bp
Hits: 20
E-val: 3.20E-72
Sim: 52.56%
 XP_026088893.1ATP-dependent RNA helicase DDX1
GO:0008033P:tRNA processing
GO:0003676F:nucleic acid binding
GO:0003723F:RNA binding
GO:0003724F:RNA helicase activity
GO:0004386F:helicase activity
GO:0004527F:exonuclease activity
GO:0005524F:ATP binding
DNA Metabolism
SRR941867_primary_scf7180002200169_94-1751
Len: 1,657 bp
Hits: 20
E-val: 2.20E-17
Sim: 93.89%
 XP_018935894.1 chromobox protein homolog 1-like isoform X1
GO:0001702P:gastrulation with mouth forming second
GO:0031507P:heterochromatin formation
GO:0003682F:chromatin binding
GO:0005634C:nucleus
GO:0005721C:pericentric heterochromatin
DNA Metabolism
SRR941867_primary_scf7180002204237_1-682
Len: 681 bp
Hits: 20
E-val: 1.70E-43
Sim: 69.36%
 XP_016338920.1 ATP-dependent RNA helicase DHX29-like
GO:0003723F:RNA binding
GO:0004386F:helicase activity
GO:0016787F:hydrolase activity
DNA Metabolism
SRR941867_primary_scf7180002207019_206-960
Len: 754 bp
Hits: 20
E-val: 7.60E-13
Sim: 97.83%
 XP_016352988.1 exosome component 10-like
GO:0000467P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0071035P:nuclear polyadenylation-dependent rRNA catabolic process
GO:0071036P:nuclear polyadenylation-dependent snoRNA catabolic process
GO:0071037P:nuclear polyadenylation-dependent snRNA catabolic process
GO:0071038P:TRAMP-dependent tRNA surveillance pathway
GO:0071039P:nuclear polyadenylation-dependent CUT catabolic process
GO:0071040P:nuclear polyadenylation-dependent antisense transcript catabolic process
GO:0071044P:histone mRNA catabolic process
GO:0071051P:poly(A)-dependent snoRNA 3'-end processing
GO:0000166F:nucleotide binding
GO:0000175F:3'-5'-RNA exonuclease activity
GO:0003727F:single-stranded RNA binding
GO:0000176C:nuclear exosome (RNase complex)
GO:0005730C:nucleolus
DNA Metabolism
SRR941867_primary_scf7180002210371_1-1206
Len: 1,205 bp
Hits: 20
E-val: 3.90E-19
Sim: 99.58%
 XP_026051405.1leucine--tRNA ligase, cytoplasmic-like
GO:0006429P:leucyl-tRNA aminoacylation
GO:0106074P:aminoacyl-tRNA metabolism involved in translational fidelity
GO:0002161F:aminoacyl-tRNA deacylase activity
GO:0004823F:leucine-tRNA ligase activity
GO:0005524F:ATP binding
DNA Metabolism
SRR941867_primary_scf7180002212742_1-1170
Len: 1,169 bp
Hits: 20
E-val: 4.20E-18
Sim: 57.84%
 XP_003964854.1 F-box/LRR-repeat protein 20 isoform X1
GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0005737C:cytoplasm
GO:0019005C:SCF ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002223146_1-1391
Len: 1,390 bp
Hits: 20
E-val: 4.30E-30
Sim: 88.83%
 XP_016320424.1 NEDD4-binding protein 2
GO:0004519F:endonuclease activity
GO:0043130F:ubiquitin binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002228667_1-788
Len: 787 bp
Hits: 20
E-val: 1.70E-100
Sim: 86.22%
 XP_018960871.1 activating signal cointegrator 1 complex subunit 3-like isoform X2
GO:0007399P:nervous system development
GO:0003676F:nucleic acid binding
GO:0004386F:helicase activity
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
DNA Metabolism
SRR941867_primary_scf7180002235164_1-688
Len: 687 bp
Hits: 20
E-val: 5.10E-24
Sim: 98.25%
 NP_957170.1pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
GO:0000398P:mRNA splicing, via spliceosome
GO:0003723F:RNA binding
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
GO:0034458F:3'-5' RNA helicase activity
GO:0005681C:spliceosomal complex
DNA Metabolism
SRR941867_primary_scf7180002315270_2010-3402
Len: 1,392 bp
Hits: 20
E-val: 2.60E-27
Sim: 63.27%
 XP_018926273.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase AMFR
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0030968P:endoplasmic reticulum unfolded protein response
GO:0070936P:protein K48-linked ubiquitination
GO:0008270F:zinc ion binding
GO:0043130F:ubiquitin binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005783C:endoplasmic reticulum
GO:0005829C:cytosol
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002315506_2264-3340
Len: 1,076 bp
Hits: 20
E-val: 1.20E-194
Sim: 86.2%
 XP_018928044.1 zinc finger BED domain-containing protein 1-like
GO:0017038P:protein import
GO:0003677F:DNA binding
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002315569_461-3290
Len: 2,829 bp
Hits: 20
E-val: 4.80E-76
Sim: 86.29%
 XP_018943561.1 LOW QUALITY PROTEIN: F-box DNA helicase 1-like
GO:0000724P:double-strand break repair via homologous recombination
GO:0031297P:replication fork processing
GO:0003677F:DNA binding
GO:0005524F:ATP binding
GO:0008194F:UDP-glycosyltransferase activity
GO:0009378F:four-way junction helicase activity
GO:0016787F:hydrolase activity
GO:0036121F:double-stranded DNA helicase activity
GO:0061749F:forked DNA-dependent helicase activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0005634C:nucleus
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002317118_1-2531
Len: 2,530 bp
Hits: 20
E-val: 2.90E-133
Sim: 95.73%
 XP_018935448.1 sterile alpha motif domain-containing protein 11-like isoform X1
GO:0003677F:DNA binding
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002317250_2173-3338
Len: 1,165 bp
Hits: 20
E-val: 7.40E-68
Sim: 81.1%
 XP_018941370.1 zinc finger BED domain-containing protein 1-like isoform X1
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002318222_441-2370
Len: 1,929 bp
Hits: 20
E-val: 3.60E-43
Sim: 97.72%
 XP_016125710.1 E3 ubiquitin-protein ligase arih1-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
GO:0016604C:nuclear body
GO:0019005C:SCF ubiquitin ligase complex
GO:0031462C:Cul2-RING ubiquitin ligase complex
GO:0031463C:Cul3-RING ubiquitin ligase complex
GO:0031464C:Cul4A-RING E3 ubiquitin ligase complex
GO:0097413C:Lewy body
DNA Metabolism
SRR941867_primary_scf7180002318437_1-1477
Len: 1,476 bp
Hits: 20
E-val: 9.90E-17
Sim: 96.23%
 XP_016137342.1 cohesin subunit SA-2-like
GO:0007059P:chromosome segregation
GO:0007062P:sister chromatid cohesion
GO:0051301P:cell division
GO:0003682F:chromatin binding
GO:0000775C:chromosome, centromeric region
GO:0000785C:chromatin
GO:0005634C:nucleus
GO:0008278C:cohesin complex
DNA Metabolism
SRR941867_primary_scf7180002318464_118-3060
Len: 2,942 bp
Hits: 20
E-val: 1.60E-18
Sim: 97.6%
 XP_026108386.1pinin-like
GO:0000387P:spliceosomal snRNP assembly
GO:0014033P:neural crest cell differentiation
GO:0003677F:DNA binding
GO:0016607C:nuclear speck
GO:0030057C:desmosome
GO:0071013C:catalytic step 2 spliceosome
DNA Metabolism
SRR941867_primary_scf7180002320074_1-1733
Len: 1,732 bp
Hits: 20
E-val: 4.00E-102
Sim: 53.43%
 XP_018938632.1 LOW QUALITY PROTEIN: cytoskeleton-associated protein 5-like
GO:0007051P:spindle organization
GO:0030951P:establishment or maintenance of microtubule cytoskeleton polarity
GO:0046785P:microtubule polymerization
GO:0051010F:microtubule plus-end binding
GO:0061863F:microtubule plus end polymerase
GO:0005856C:cytoskeleton
GO:0043232C:intracellular membraneless organelle
GO:0099080C:supramolecular complex
DNA Metabolism