Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR941867_primary_scf7180002357408_458-1142
Len: 684 bp
Hits: 20
E-val: 2.40E-18
Sim: 94.64%
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XP_026098358.1WD repeat and HMG-box DNA-binding protein 1 |
GO:0000278P:mitotic cell cycle GO:0006261P:DNA-templated DNA replication GO:0006281P:DNA repair GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0043596C:nuclear replication fork |
DNA Metabolism
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SRR941867_primary_scf7180002357547_993-1378
Len: 385 bp
Hits: 20
E-val: 3.10E-23
Sim: 82.7%
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AWP14933.1putative AN1-type zinc finger protein 5-like |
GO:0003677F:DNA binding GO:0008270F:zinc ion binding |
DNA Metabolism
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SRR941867_primary_scf7180002358537_1-1831
Len: 1,830 bp
Hits: 20
E-val: 6.60E-63
Sim: 58.46%
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XP_016121707.1 protein zyg-11 homolog |
GO:0048513P:animal organ development GO:0016020C:membrane GO:0031462C:Cul2-RING ubiquitin ligase complex |
DNA Metabolism
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SRR941867_primary_scf7180002360832_1-757
Len: 756 bp
Hits: 20
E-val: 3.90E-33
Sim: 95.38%
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XP_026144084.1DNA topoisomerase 2-beta-like isoform X2 |
GO:0000712P:resolution of meiotic recombination intermediates GO:0000819P:sister chromatid segregation GO:0006265P:DNA topological change GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0034335F:DNA negative supercoiling activity GO:0046872F:metal ion binding GO:0005654C:nucleoplasm GO:0005730C:nucleolus |
DNA Metabolism
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SRR941867_primary_scf7180002361307_1-988
Len: 987 bp
Hits: 20
E-val: 6.20E-23
Sim: 95.73%
|
XP_026070444.1protein angel homolog 2-like isoform X1 |
GO:0070935P:3'-UTR-mediated mRNA stabilization GO:0000175F:3'-5'-RNA exonuclease activity GO:0003730F:mRNA 3'-UTR binding |
DNA Metabolism
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SRR941867_primary_scf7180002361601_1-574
Len: 573 bp
Hits: 20
E-val: 2.60E-53
Sim: 77.77%
|
XP_018978410.1 regulator of G-protein signaling 21-like |
GO:0000724P:double-strand break repair via homologous recombination GO:0003684F:damaged DNA binding GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0000781C:chromosome, telomeric region GO:0005634C:nucleus GO:0030915C:Smc5-Smc6 complex GO:0035861C:site of double-strand break |
DNA Metabolism
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SRR941867_primary_scf7180002361757_1-776
Len: 775 bp
Hits: 20
E-val: 5.50E-27
Sim: 97.78%
|
XP_016360017.1 LIM and calponin homology domains-containing protein 1-like |
GO:0051496P:positive regulation of stress fiber assembly GO:0051893P:regulation of focal adhesion assembly GO:0003779F:actin binding GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0032034F:myosin II head/neck binding GO:0001725C:stress fiber |
DNA Metabolism
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SRR941867_primary_scf7180002362568_1-773
Len: 772 bp
Hits: 20
E-val: 2.00E-24
Sim: 83.86%
|
XP_018975345.1 LOW QUALITY PROTEIN: integrin alpha-10-like |
GO:0007399P:nervous system development GO:0003676F:nucleic acid binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity |
DNA Metabolism
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SRR941867_primary_scf7180002362847_1-1035
Len: 1,034 bp
Hits: 20
E-val: 2.80E-127
Sim: 95.71%
|
XP_018951160.1 tripartite motif-containing protein 2-like, partial |
GO:0000209P:protein polyubiquitination GO:0007399P:nervous system development GO:0030099P:myeloid cell differentiation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0060215P:primitive hemopoiesis GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
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SRR941867_primary_scf7180002363345_1-1297
Len: 1,296 bp
Hits: 20
E-val: 3.10E-107
Sim: 90.53%
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XP_018971439.1 nuclear factor 7, ovary-like |
GO:0045087P:innate immune response GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002363427_1-1328
Len: 1,327 bp
Hits: 20
E-val: 1.60E-21
Sim: 95.55%
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ROK87121.1Regulation of nuclear pre-mRNA domain-containing protein 2 |
GO:0031124P:mRNA 3'-end processing GO:0099122F:RNA polymerase II C-terminal domain binding |
DNA Metabolism
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SRR941867_primary_scf7180002366330_1-1864
Len: 1,863 bp
Hits: 20
E-val: 7.10E-28
Sim: 94.09%
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XP_026074790.1histone chaperone asf1b-A-like |
GO:0006335P:DNA replication-dependent chromatin assembly GO:0042393F:histone binding GO:0000785C:chromatin GO:0005634C:nucleus |
DNA Metabolism
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SRR941867_primary_scf7180002366799_1-712
Len: 711 bp
Hits: 20
E-val: 4.60E-52
Sim: 80.09%
|
XP_026052927.1lysine-specific demethylase 4B-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0010468P:regulation of gene expression GO:0008270F:zinc ion binding GO:0140684F:histone H3K9me2/H3K9me3 demethylase activity GO:0000785C:chromatin GO:0005634C:nucleus |
DNA Metabolism
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SRR941867_primary_scf7180002367592_1-1087
Len: 1,086 bp
Hits: 20
E-val: 2.40E-44
Sim: 74.83%
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ROJ36303.1RNA-directed DNA polymerase from mobile element jockey |
GO:0006278P:RNA-templated DNA biosynthetic process GO:0003964F:RNA-directed DNA polymerase activity |
DNA Metabolism
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SRR941867_primary_scf7180002370127_384-971
Len: 587 bp
Hits: 20
E-val: 1.10E-35
Sim: 53.67%
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XP_018936305.1 E3 ubiquitin-protein ligase UBR1 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002370842_474-1673
Len: 1,199 bp
Hits: 20
E-val: 2.50E-18
Sim: 85.22%
|
XP_026107983.1maternal DNA replication licensing factor mcm6-like |
GO:0000727P:double-strand break repair via break-induced replication GO:0006270P:DNA replication initiation GO:1902969P:mitotic DNA replication GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0042555C:MCM complex |
DNA Metabolism
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SRR941867_primary_scf7180002372308_681-1092
Len: 411 bp
Hits: 20
E-val: 3.30E-47
Sim: 97.57%
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XP_016359671.1 E3 ubiquitin-protein ligase TRIM62-like isoform X1 |
DNA Metabolism
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SRR941867_primary_scf7180002374393_1-970
Len: 969 bp
Hits: 20
E-val: 2.30E-107
Sim: 80.73%
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XP_018981441.1 E3 ubiquitin-protein ligase SHPRH |
GO:0000209P:protein polyubiquitination GO:0006334P:nucleosome assembly GO:0006974P:DNA damage response GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0061630F:ubiquitin protein ligase activity GO:0000786C:nucleosome GO:0005634C:nucleus GO:0016020C:membrane |
DNA Metabolism
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SRR941867_primary_scf7180002376296_1-1248
Len: 1,247 bp
Hits: 20
E-val: 9.20E-32
Sim: 97.58%
|
XP_018971587.1 LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like |
GO:0006298P:mismatch repair GO:0043570P:maintenance of DNA repeat elements GO:0005524F:ATP binding GO:0032137F:guanine/thymine mispair binding GO:0140664F:ATP-dependent DNA damage sensor activity GO:0032301C:MutSalpha complex |
DNA Metabolism
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SRR941867_primary_scf7180002377516_268-1281
Len: 1,013 bp
Hits: 20
E-val: 1.80E-46
Sim: 98.74%
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XP_026080272.1E3 ubiquitin-protein ligase UBR2-like isoform X3 |
GO:0016567P:protein ubiquitination GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
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SRR941867_primary_scf7180002379328_211-785
Len: 574 bp
Hits: 20
E-val: 1.00E-33
Sim: 98.08%
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XP_005060265.1 ras-related protein Rab-3A |
GO:0003016P:respiratory system process GO:0006886P:intracellular protein transport GO:0007005P:mitochondrion organization GO:0007274P:neuromuscular synaptic transmission GO:0007409P:axonogenesis GO:0009791P:post-embryonic development GO:0016188P:synaptic vesicle maturation GO:0030073P:insulin secretion GO:0030324P:lung development GO:0031630P:regulation of synaptic vesicle fusion to presynaptic active zone membrane GO:0032418P:lysosome localization GO:0048172P:regulation of short-term neuronal synaptic plasticity GO:0048489P:synaptic vesicle transport GO:0048790P:maintenance of presynaptic active zone structure GO:0050975P:sensory perception of touch GO:0051602P:response to electrical stimulus GO:0060478P:acrosomal vesicle exocytosis GO:0061670P:evoked neurotransmitter secretion GO:0097091P:synaptic vesicle clustering GO:0099161P:regulation of presynaptic dense core granule exocytosis GO:1903307P:positive regulation of regulated secretory pathway GO:1905684P:regulation of plasma membrane repair GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0030674F:protein-macromolecule adaptor activity GO:0030742F:GTP-dependent protein binding GO:0031489F:myosin V binding GO:0001669C:acrosomal vesicle GO:0005768C:endosome GO:0005886C:plasma membrane GO:0030672C:synaptic vesicle membrane GO:0043195C:terminal bouton GO:0048471C:perinuclear region of cytoplasm GO:0048786C:presynaptic active zone GO:0098794C:postsynapse |
DNA Metabolism
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SRR941867_primary_scf7180002381769_1-782
Len: 781 bp
Hits: 20
E-val: 5.50E-51
Sim: 77.25%
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XP_018981611.1 tRNA-splicing ligase RtcB homolog |
GO:0006388P:tRNA splicing, via endonucleolytic cleavage and ligation GO:0008452F:RNA ligase activity GO:0043167F:ion binding GO:0005634C:nucleus GO:0072669C:tRNA-splicing ligase complex |
DNA Metabolism
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SRR941867_primary_scf7180002381898_47-698
Len: 651 bp
Hits: 20
E-val: 4.70E-27
Sim: 96.25%
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XP_018975287.1 ubiquitin-conjugating enzyme E2 variant 3-like |
GO:0008333P:endosome to lysosome transport GO:0015031P:protein transport GO:0097039P:protein linear polyubiquitination GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding GO:0036435F:K48-linked polyubiquitin modification-dependent protein binding GO:0061630F:ubiquitin protein ligase activity GO:0070530F:K63-linked polyubiquitin modification-dependent protein binding GO:1990450F:linear polyubiquitin binding GO:0000813C:ESCRT I complex GO:0071797C:LUBAC complex |
DNA Metabolism
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SRR941867_primary_scf7180002382206_1-774
Len: 773 bp
Hits: 20
E-val: 3.30E-56
Sim: 72.6%
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XP_005162058.1zinc finger BED domain-containing protein 4 isoform X3 |
GO:0016874F:ligase activity GO:0046983F:protein dimerization activity GO:0110165C:cellular anatomical structure |
DNA Metabolism
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SRR941867_primary_scf7180002382361_1-936
Len: 935 bp
Hits: 20
E-val: 3.00E-19
Sim: 61.44%
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XP_018967855.1 receptor-type tyrosine-protein phosphatase gamma-like |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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