Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 26 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR941867_primary_scf7180002382417_149-837
Len: 688 bp
Hits: 20
E-val: 3.70E-99
Sim: 93.4%
 XP_016387657.1 zinc-binding protein A33-like
GO:0014004P:microglia differentiation
GO:0016567P:protein ubiquitination
GO:0045087P:innate immune response
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002384501_377-738
Len: 361 bp
Hits: 20
E-val: 1.50E-38
Sim: 88.15%
 RXN08305.1cysteine--tRNA cytoplasmic isoform X1
GO:0006423P:cysteinyl-tRNA aminoacylation
GO:0004817F:cysteine-tRNA ligase activity
GO:0005524F:ATP binding
GO:0046872F:metal ion binding
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002385730_1-1188
Len: 1,187 bp
Hits: 20
E-val: 8.50E-35
Sim: 93.58%
 AAI15198.1Trpc4apa protein, partial
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0019902F:phosphatase binding
GO:0031464C:Cul4A-RING E3 ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002390028_1-1163
Len: 1,162 bp
Hits: 20
E-val: 1.40E-58
Sim: 64.78%
 XP_018957550.1 calcineurin-binding protein cabin-1
GO:0006325P:chromatin organization
GO:0031491F:nucleosome binding
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002390066_1-647
Len: 646 bp
Hits: 20
E-val: 1.10E-44
Sim: 96.24%
 XP_018980784.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF170-like
GO:0016567P:protein ubiquitination
GO:0043009P:chordate embryonic development
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005789C:endoplasmic reticulum membrane
DNA Metabolism
SRR941867_primary_scf7180002390554_1-1134
Len: 1,133 bp
Hits: 20
E-val: 3.80E-16
Sim: 97.68%
 XP_026105905.1tubulin beta chain-like isoform X1
GO:0000278P:mitotic cell cycle
GO:0030705P:cytoskeleton-dependent intracellular transport
GO:0031101P:fin regeneration
GO:0042267P:natural killer cell mediated cytotoxicity
GO:0050807P:regulation of synapse organization
GO:0051225P:spindle assembly
GO:0051301P:cell division
GO:0071895P:odontoblast differentiation
GO:0003924F:GTPase activity
GO:0005200F:structural constituent of cytoskeleton
GO:0005525F:GTP binding
GO:0019904F:protein domain specific binding
GO:0031625F:ubiquitin protein ligase binding
GO:0032794F:GTPase activating protein binding
GO:0042288F:MHC class I protein binding
GO:0044877F:protein-containing complex binding
GO:0046872F:metal ion binding
GO:0005576C:extracellular region
GO:0005641C:nuclear envelope lumen
GO:0005829C:cytosol
GO:0005874C:microtubule
GO:0032991C:protein-containing complex
GO:0035578C:azurophil granule lumen
GO:0036464C:cytoplasmic ribonucleoprotein granule
GO:0044297C:cell body
GO:0045121C:membrane raft
GO:0045171C:intercellular bridge
GO:0072686C:mitotic spindle
DNA Metabolism
SRR941867_primary_scf7180002391113_1-634
Len: 633 bp
Hits: 20
E-val: 2.40E-12
Sim: 99.47%
 XP_009304167.1regulator of telomere elongation helicase 1 isoform X1
GO:0006260P:DNA replication
GO:0010569P:regulation of double-strand break repair via homologous recombination
GO:0045910P:negative regulation of DNA recombination
GO:0090657P:telomeric loop disassembly
GO:1904430P:negative regulation of t-circle formation
GO:0003677F:DNA binding
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0009378F:four-way junction helicase activity
GO:0016887F:ATP hydrolysis activity
GO:0036121F:double-stranded DNA helicase activity
GO:0051539F:4 iron, 4 sulfur cluster binding
GO:0061749F:forked DNA-dependent helicase activity
GO:0070182F:DNA polymerase binding
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002393385_1-931
Len: 930 bp
Hits: 20
E-val: 3.90E-27
Sim: 95.15%
 XP_026075167.1spermatid perinuclear RNA-binding protein-like isoform X3
GO:0007283P:spermatogenesis
GO:0030154P:cell differentiation
GO:0003677F:DNA binding
GO:0003725F:double-stranded RNA binding
GO:0003727F:single-stranded RNA binding
GO:0005737C:cytoplasm
GO:0071011C:precatalytic spliceosome
DNA Metabolism
SRR941867_primary_scf7180002395160_1-464
Len: 463 bp
Hits: 20
E-val: 2.60E-16
Sim: 100%
 NP_956057.1RING finger protein 145
GO:0036503P:ERAD pathway
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061515P:myeloid cell development
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0012505C:endomembrane system
GO:0016020C:membrane
DNA Metabolism
SRR941867_primary_scf7180002402417_1-1015
Len: 1,014 bp
Hits: 20
E-val: 2.60E-32
Sim: 98.96%
 XP_026140430.1cohesin subunit SA-1
GO:0007059P:chromosome segregation
GO:0007062P:sister chromatid cohesion
GO:0051301P:cell division
GO:0003682F:chromatin binding
GO:0000775C:chromosome, centromeric region
GO:0000785C:chromatin
GO:0005634C:nucleus
GO:0008278C:cohesin complex
DNA Metabolism
SRR941867_primary_scf7180002403147_1-1118
Len: 1,117 bp
Hits: 20
E-val: 1.00E-45
Sim: 99.73%
 XP_016120641.1 E3 ubiquitin-protein ligase LNX-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0004842F:ubiquitin-protein transferase activity
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002405713_1-529
Len: 528 bp
Hits: 10
E-val: 2.30E-08
Sim: 98.24%
 XP_026110949.1cohesin subunit SA-2-like
GO:0007059P:chromosome segregation
GO:0007062P:sister chromatid cohesion
GO:0051301P:cell division
GO:0003682F:chromatin binding
GO:0000775C:chromosome, centromeric region
GO:0000785C:chromatin
GO:0005634C:nucleus
GO:0008278C:cohesin complex
DNA Metabolism
SRR941867_primary_scf7180002408665_1-802
Len: 801 bp
Hits: 20
E-val: 9.20E-25
Sim: 66.07%
 XP_016118949.1 phenylalanine--tRNA ligase beta subunit-like, partial
GO:0006432P:phenylalanyl-tRNA aminoacylation
GO:0000287F:magnesium ion binding
GO:0003723F:RNA binding
GO:0004826F:phenylalanine-tRNA ligase activity
GO:0005524F:ATP binding
GO:0009328C:phenylalanine-tRNA ligase complex
DNA Metabolism
SRR941867_primary_scf7180002410200_1-1403
Len: 1,402 bp
Hits: 20
E-val: 2.10E-24
Sim: 96.01%
 XP_018957813.1 LOW QUALITY PROTEIN: protein zyg-11 homolog
GO:0048513P:animal organ development
GO:0031462C:Cul2-RING ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002418056_541-961
Len: 420 bp
Hits: 20
E-val: 2.50E-26
Sim: 99.65%
 XP_018953142.1 DCN1-like protein 2 isoform X1
GO:0045116P:protein neddylation
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0032182F:ubiquitin-like protein binding
GO:0097602F:cullin family protein binding
GO:0000151C:ubiquitin ligase complex
DNA Metabolism
SRR941867_primary_scf7180002439042_66-815
Len: 749 bp
Hits: 20
E-val: 2.90E-25
Sim: 96.59%
 RXN15248.1maternal DNA replication licensing factor mcm3-like isoform X1
GO:0000727P:double-strand break repair via break-induced replication
GO:0006271P:DNA strand elongation involved in DNA replication
GO:1902975P:mitotic DNA replication initiation
GO:0003697F:single-stranded DNA binding
GO:0005524F:ATP binding
GO:0009378F:four-way junction helicase activity
GO:0016887F:ATP hydrolysis activity
GO:0036121F:double-stranded DNA helicase activity
GO:0061749F:forked DNA-dependent helicase activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0005634C:nucleus
GO:0042555C:MCM complex
DNA Metabolism
SRR941867_primary_scf7180002441395_1-1032
Len: 1,031 bp
Hits: 20
E-val: 3.30E-27
Sim: 94.12%
 ROK23409.1Heterogeneous nuclear ribonucleoprotein K
GO:0006397P:mRNA processing
GO:0008380P:RNA splicing
GO:0003677F:DNA binding
GO:0003723F:RNA binding
GO:0016787F:hydrolase activity
GO:0002102C:podosome
GO:0005654C:nucleoplasm
GO:0005681C:spliceosomal complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002666620_1-1446
Len: 1,445 bp
Hits: 20
E-val: 2.00E-203
Sim: 84.69%
 XP_018953787.1 tripartite motif-containing protein 45 isoform X1
GO:0007399P:nervous system development
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005654C:nucleoplasm
DNA Metabolism
SRR941867_primary_scf7180002666767_1-373
Len: 372 bp
Hits: 20
E-val: 6.20E-16
Sim: 98.11%
 XP_026084351.1ankyrin repeat and IBR domain-containing protein 1-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002666813_1-1889
Len: 1,888 bp
Hits: 20
E-val: 2.40E-31
Sim: 69.62%
 XP_016114876.1 biotin--protein ligase isoform X1
GO:0004077F:biotin--[biotin carboxyl-carrier protein] ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR941867_primary_scf7180002667203_1-1510
Len: 1,509 bp
Hits: 20
E-val: 1.50E-89
Sim: 78.38%
 XP_016325777.1 craniofacial development protein 2-like, partial
GO:0071897P:DNA biosynthetic process
GO:0003824F:catalytic activity
DNA Metabolism
SRR941867_primary_scf7180002667861_388-1008
Len: 620 bp
Hits: 20
E-val: 1.80E-113
Sim: 88.62%
 XP_018973740.1 ribonuclease P protein subunit p25-like protein
GO:0001682P:tRNA 5'-leader removal
GO:0003723F:RNA binding
GO:0000172C:ribonuclease MRP complex
GO:0005634C:nucleus
DNA Metabolism
SRR941867_primary_scf7180002668186_1-937
Len: 936 bp
Hits: 20
E-val: 7.20E-13
Sim: 92.71%
 KPP61209.1putative ATP-dependent RNA helicase DDX20, partial
GO:0000387P:spliceosomal snRNP assembly
GO:0031101P:fin regeneration
GO:0070657P:neuromast regeneration
GO:0097421P:liver regeneration
GO:0003724F:RNA helicase activity
GO:0003729F:mRNA binding
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
GO:0005829C:cytosol
GO:0032797C:SMN complex
DNA Metabolism
SRR941867_primary_scf7180002668427_1-1010
Len: 1,009 bp
Hits: 20
E-val: 4.70E-26
Sim: 94.26%
 XP_016101759.1 LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic
GO:0006428P:isoleucyl-tRNA aminoacylation
GO:0106074P:aminoacyl-tRNA metabolism involved in translational fidelity
GO:1903670P:regulation of sprouting angiogenesis
GO:0000049F:tRNA binding
GO:0002161F:aminoacyl-tRNA deacylase activity
GO:0004822F:isoleucine-tRNA ligase activity
GO:0005524F:ATP binding
DNA Metabolism
SRR941867_primary_scf7180002669208_1-754
Len: 753 bp
Hits: 20
E-val: 1.80E-35
Sim: 98.27%
 XP_018966825.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin-like
GO:0016567P:protein ubiquitination
GO:0072344P:rescue of stalled ribosome
GO:1990116P:ribosome-associated ubiquitin-dependent protein catabolic process
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0043023F:ribosomal large subunit binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005829C:cytosol
GO:1990112C:RQC complex
DNA Metabolism