Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001898753_1-3504
Len: 3,503 bp
Hits: 20
E-val: 2.90E-22
Sim: 78.03%
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XP_018921886.1 parkin coregulated gene protein homolog |
GO:0007286P:spermatid development GO:0007368P:determination of left/right symmetry GO:0008104P:intracellular protein localization GO:0030317P:flagellated sperm motility GO:0034620P:cellular response to unfolded protein GO:0008092F:cytoskeletal protein binding GO:0030544F:Hsp70 protein binding GO:0031625F:ubiquitin protein ligase binding GO:0051879F:Hsp90 protein binding GO:0002177C:manchette GO:0005829C:cytosol GO:0031982C:vesicle GO:0043005C:neuron projection GO:0044297C:cell body GO:0097225C:sperm midpiece GO:0097386C:glial cell projection GO:0160112C:axonemal B tubule inner sheath |
DNA Metabolism
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SRR953582_primary_scf7180001899245_2521-2906
Len: 385 bp
Hits: 20
E-val: 1.80E-15
Sim: 99.47%
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XP_026073770.1chromatin assembly factor 1 subunit B-like |
GO:0000278P:mitotic cell cycle GO:0006334P:nucleosome assembly GO:0006335P:DNA replication-dependent chromatin assembly GO:0048568P:embryonic organ development GO:0060041P:retina development in camera-type eye GO:0008270F:zinc ion binding GO:0016887F:ATP hydrolysis activity GO:0016605C:PML body GO:0033186C:CAF-1 complex |
DNA Metabolism
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SRR953582_primary_scf7180001900093_608-1237
Len: 629 bp
Hits: 20
E-val: 1.10E-49
Sim: 88.15%
|
RXN19047.1histone H1-like protein |
GO:0006334P:nucleosome assembly GO:0030261P:chromosome condensation GO:0045910P:negative regulation of DNA recombination GO:0003690F:double-stranded DNA binding GO:0030527F:structural constituent of chromatin GO:0031492F:nucleosomal DNA binding GO:0000786C:nucleosome GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180001900128_1327-1704
Len: 377 bp
Hits: 20
E-val: 1.50E-57
Sim: 91.37%
|
XP_018964623.1 protein ABHD17A-like |
GO:0010890P:positive regulation of triglyceride storage GO:0098734P:macromolecule depalmitoylation GO:0099175P:regulation of postsynapse organization GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0008474F:palmitoyl-(protein) hydrolase activity GO:0005811C:lipid droplet GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0010008C:endosome membrane |
DNA Metabolism
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SRR953582_primary_scf7180001900378_419-984
Len: 565 bp
Hits: 20
E-val: 3.20E-16
Sim: 96.15%
|
XP_026124089.1structural maintenance of chromosomes flexible hinge domain-containing protein 1 |
GO:0006302P:double-strand break repair GO:0051276P:chromosome organization GO:0060216P:definitive hemopoiesis GO:0060348P:bone development GO:0005524F:ATP binding GO:0005694C:chromosome GO:0031981C:nuclear lumen |
DNA Metabolism
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SRR953582_primary_scf7180001904614_2074-2922
Len: 848 bp
Hits: 20
E-val: 2.40E-164
Sim: 99.77%
|
XP_026143213.1E3 ubiquitin-protein ligase Siah1-like isoform X1 |
GO:0016567P:protein ubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0051402P:neuron apoptotic process GO:0008270F:zinc ion binding GO:0031624F:ubiquitin conjugating enzyme binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005829C:cytosol |
DNA Metabolism
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SRR953582_primary_scf7180001904994_2019-2967
Len: 948 bp
Hits: 20
E-val: 1.40E-48
Sim: 62.53%
|
XP_018941099.1 probable E3 ubiquitin-protein ligase HERC4 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180001905515_1-2542
Len: 2,541 bp
Hits: 20
E-val: 8.20E-19
Sim: 99.58%
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XP_026051405.1leucine--tRNA ligase, cytoplasmic-like |
GO:0006429P:leucyl-tRNA aminoacylation GO:0106074P:aminoacyl-tRNA metabolism involved in translational fidelity GO:0002161F:aminoacyl-tRNA deacylase activity GO:0004823F:leucine-tRNA ligase activity GO:0005524F:ATP binding |
DNA Metabolism
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SRR953582_primary_scf7180001907274_670-2426
Len: 1,756 bp
Hits: 20
E-val: 3.30E-35
Sim: 70.21%
|
RXN35267.1E3 ubiquitin- ligase synoviolin-like protein |
GO:0036503P:ERAD pathway GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0061630F:ubiquitin protein ligase activity GO:0016020C:membrane GO:0044322C:endoplasmic reticulum quality control compartment |
DNA Metabolism
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SRR953582_primary_scf7180001907371_1-3288
Len: 3,287 bp
Hits: 20
E-val: 7.80E-46
Sim: 59.37%
|
XP_018980714.1 helicase SKI2W-like |
GO:0006401P:RNA catabolic process GO:0004386F:helicase activity GO:0005488F:binding GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180001908830_1-2803
Len: 2,802 bp
Hits: 20
E-val: 2.60E-58
Sim: 92.99%
|
XP_016337303.1 probable phospholipid-transporting ATPase VA |
GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0004842F:ubiquitin-protein transferase activity GO:0005524F:ATP binding GO:0016874F:ligase activity GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005886C:plasma membrane |
DNA Metabolism
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SRR953582_primary_scf7180001909343_471-1547
Len: 1,076 bp
Hits: 20
E-val: 1.20E-104
Sim: 97.16%
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XP_016351985.1 F-box/LRR-repeat protein 14-like |
GO:0016567P:protein ubiquitination GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0004842F:ubiquitin-protein transferase activity GO:0019005C:SCF ubiquitin ligase complex |
DNA Metabolism
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SRR953582_primary_scf7180001909530_1-2604
Len: 2,603 bp
Hits: 20
E-val: 2.50E-31
Sim: 98%
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RXN08829.1JNK1 MAPK8-associated membrane -like protein |
GO:0006986P:response to unfolded protein GO:0036503P:ERAD pathway GO:0031625F:ubiquitin protein ligase binding GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180001910367_1-1050
Len: 1,049 bp
Hits: 20
E-val: 1.40E-36
Sim: 83.33%
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XP_026097597.1sterile alpha motif domain-containing protein 11 isoform X3 |
DNA Metabolism
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SRR953582_primary_scf7180001915264_50-8032
Len: 7,982 bp
Hits: 20
E-val: 4.00E-80
Sim: 61.08%
|
XP_018921678.1 LOW QUALITY PROTEIN: protein NRDE2 homolog |
GO:0006396P:RNA processing GO:0031048P:regulatory ncRNA-mediated heterochromatin formation GO:1902369P:negative regulation of RNA catabolic process GO:0071013C:catalytic step 2 spliceosome |
DNA Metabolism
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SRR953582_primary_scf7180001915411_1-8893
Len: 8,892 bp
Hits: 20
E-val: 7.20E-46
Sim: 98.13%
|
RXN34157.1zinc finger SWIM domain-containing 6 |
GO:0008270F:zinc ion binding GO:0031462C:Cul2-RING ubiquitin ligase complex |
DNA Metabolism
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SRR953582_primary_scf7180001915503_1-4598
Len: 4,597 bp
Hits: 20
E-val: 2.00E-23
Sim: 99.49%
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XP_026068821.1receptor-type tyrosine-protein phosphatase T-like |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180001915674_453-1061
Len: 608 bp
Hits: 20
E-val: 2.00E-109
Sim: 91.1%
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XP_018978316.1 RING finger protein 222-like |
GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180001916183_1661-4442
Len: 2,781 bp
Hits: 20
E-val: 1.90E-295
Sim: 82.25%
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XP_026112707.1probable ribonuclease ZC3H12B isoform X1 |
GO:0003729F:mRNA binding GO:0004521F:RNA endonuclease activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0036464C:cytoplasmic ribonucleoprotein granule |
DNA Metabolism
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SRR953582_primary_scf7180001916698_1-5876
Len: 5,875 bp
Hits: 20
E-val: 2.50E-31
Sim: 97.71%
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CDQ86474.1unnamed protein product |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180001916769_1-3045
Len: 3,044 bp
Hits: 20
E-val: 2.60E-19
Sim: 57.85%
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RXN02716.1NEDD8-activating enzyme E1 catalytic subunit-like isoform X1 |
GO:0007165P:signal transduction GO:0032446P:protein modification by small protein conjugation GO:0045116P:protein neddylation GO:0005524F:ATP binding GO:0008641F:ubiquitin-like modifier activating enzyme activity GO:0016874F:ligase activity GO:0019781F:NEDD8 activating enzyme activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180001917379_1-3399
Len: 3,398 bp
Hits: 20
E-val: 2.30E-56
Sim: 89.91%
|
XP_016118664.1 protein cramped-like, partial |
GO:0007389P:pattern specification process GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180001919281_1-3910
Len: 3,909 bp
Hits: 20
E-val: 1.10E-67
Sim: 74.63%
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XP_018931625.1 transcription initiation factor TFIID subunit 8-like |
GO:0006313P:DNA transposition GO:0010467P:gene expression GO:0015074P:DNA integration GO:0032774P:RNA biosynthetic process GO:0003677F:DNA binding GO:0005515F:protein binding GO:0005576C:extracellular region GO:0005634C:nucleus GO:0016020C:membrane GO:0032991C:protein-containing complex |
DNA Metabolism
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SRR953582_primary_scf7180001919389_720-2501
Len: 1,781 bp
Hits: 20
E-val: 8.50E-47
Sim: 51.5%
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XP_026134134.1non-structural maintenance of chromosomes element 4 homolog A-like |
GO:0006281P:DNA repair GO:0006310P:DNA recombination GO:0005634C:nucleus GO:0005694C:chromosome GO:0030915C:Smc5-Smc6 complex |
DNA Metabolism
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SRR953582_primary_scf7180001920504_195-2358
Len: 2,163 bp
Hits: 20
E-val: 1.90E-69
Sim: 52.66%
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XP_016411351.1 double-strand-break repair protein rad21 homolog isoform X1 |
GO:0007059P:chromosome segregation GO:0007062P:sister chromatid cohesion GO:1990414P:replication-born double-strand break repair via sister chromatid exchange GO:0003682F:chromatin binding GO:0005634C:nucleus GO:0005694C:chromosome GO:0008278C:cohesin complex |
DNA Metabolism
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