Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 31 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR953582_primary_scf7180001951337_1457-2499
Len: 1,042 bp
Hits: 20
E-val: 8.50E-39
Sim: 59.2%
 XP_018948380.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
GO:0003723F:RNA binding
GO:0004386F:helicase activity
GO:0005681C:spliceosomal complex
DNA Metabolism
SRR953582_primary_scf7180001951669_251-825
Len: 574 bp
Hits: 20
E-val: 2.00E-34
Sim: 98.1%
 XP_005060265.1 ras-related protein Rab-3A
GO:0003016P:respiratory system process
GO:0006886P:intracellular protein transport
GO:0007005P:mitochondrion organization
GO:0007274P:neuromuscular synaptic transmission
GO:0007409P:axonogenesis
GO:0009791P:post-embryonic development
GO:0016188P:synaptic vesicle maturation
GO:0030073P:insulin secretion
GO:0030324P:lung development
GO:0031630P:regulation of synaptic vesicle fusion to presynaptic active zone membrane
GO:0032418P:lysosome localization
GO:0048172P:regulation of short-term neuronal synaptic plasticity
GO:0048489P:synaptic vesicle transport
GO:0048790P:maintenance of presynaptic active zone structure
GO:0050975P:sensory perception of touch
GO:0051602P:response to electrical stimulus
GO:0060478P:acrosomal vesicle exocytosis
GO:0061670P:evoked neurotransmitter secretion
GO:0097091P:synaptic vesicle clustering
GO:0099161P:regulation of presynaptic dense core granule exocytosis
GO:1903307P:positive regulation of regulated secretory pathway
GO:1905684P:regulation of plasma membrane repair
GO:0003924F:GTPase activity
GO:0005525F:GTP binding
GO:0030674F:protein-macromolecule adaptor activity
GO:0030742F:GTP-dependent protein binding
GO:0031489F:myosin V binding
GO:0001669C:acrosomal vesicle
GO:0005768C:endosome
GO:0005886C:plasma membrane
GO:0030672C:synaptic vesicle membrane
GO:0043195C:terminal bouton
GO:0048471C:perinuclear region of cytoplasm
GO:0048786C:presynaptic active zone
GO:0098794C:postsynapse
DNA Metabolism
SRR953582_primary_scf7180001951698_807-2930
Len: 2,123 bp
Hits: 20
E-val: 1.70E-30
Sim: 65%
 ROI15466.1Lymphoid-restricted membrane protein
GO:0007052P:mitotic spindle organization
GO:0007344P:pronuclear fusion
GO:0035046P:pronuclear migration
GO:0051028P:mRNA transport
GO:0051984P:positive regulation of chromosome segregation
GO:0000785C:chromatin
GO:0005789C:endoplasmic reticulum membrane
GO:0005813C:centrosome
GO:0031965C:nuclear membrane
GO:0097431C:mitotic spindle pole
DNA Metabolism
SRR953582_primary_scf7180001951890_1-3192
Len: 3,191 bp
Hits: 20
E-val: 1.10E-161
Sim: 53.01%
 XP_018952919.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Hakai-like
GO:0016567P:protein ubiquitination
GO:0030155P:regulation of cell adhesion
GO:0008270F:zinc ion binding
GO:0016740F:transferase activity
GO:0016874F:ligase activity
GO:0046872F:metal ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180001952445_1-1523
Len: 1,522 bp
Hits: 20
E-val: 3.90E-24
Sim: 97.38%
 XP_018947431.1 DNA demethylase ALKBH1-like
GO:0006281P:DNA repair
GO:0032259P:methylation
GO:0035513P:oxidative RNA demethylation
GO:0008168F:methyltransferase activity
GO:0008198F:ferrous iron binding
GO:0035515F:oxidative RNA demethylase activity
GO:0035516F:broad specificity oxidative DNA demethylase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180001952506_1-1154
Len: 1,153 bp
Hits: 20
E-val: 4.80E-27
Sim: 73.53%
 NP_997733.2serine/threonine-protein phosphatase 1 regulatory subunit 10
GO:0008157F:protein phosphatase 1 binding
GO:0046872F:metal ion binding
GO:0000785C:chromatin
GO:0072357C:PTW/PP1 phosphatase complex
DNA Metabolism
SRR953582_primary_scf7180001952727_1-2360
Len: 2,359 bp
Hits: 20
E-val: 4.50E-88
Sim: 88.59%
 XP_018982128.1 kelch-like protein 29
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1990756F:ubiquitin-like ligase-substrate adaptor activity
GO:0005737C:cytoplasm
GO:0016020C:membrane
GO:0031463C:Cul3-RING ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180001953499_1-1816
Len: 1,815 bp
Hits: 20
E-val: 1.20E-32
Sim: 51.31%
 XP_018955155.1 protein HID1-like, partial
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0003964F:RNA-directed DNA polymerase activity
GO:0000138C:Golgi trans cisterna
GO:0005797C:Golgi medial cisterna
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180001953623_824-2849
Len: 2,025 bp
Hits: 20
E-val: 3.90E-32
Sim: 83.78%
 XP_018937752.1 DNA polymerase epsilon subunit 4-like
GO:0006261P:DNA-templated DNA replication
GO:0006955P:immune response
GO:0060326P:cell chemotaxis
GO:0008009F:chemokine activity
GO:0046982F:protein heterodimerization activity
GO:0005576C:extracellular region
GO:0008622C:epsilon DNA polymerase complex
DNA Metabolism
SRR953582_primary_scf7180001953724_1-3251
Len: 3,250 bp
Hits: 20
E-val: 1.70E-32
Sim: 95.13%
 XP_018967819.1 receptor-type tyrosine-protein phosphatase gamma-like
GO:0006338P:chromatin remodeling
GO:0004089F:carbonate dehydratase activity
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0008270F:zinc ion binding
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0005886C:plasma membrane
DNA Metabolism
SRR953582_primary_scf7180001954122_1-1728
Len: 1,727 bp
Hits: 20
E-val: 3.60E-34
Sim: 97.72%
 XP_026123560.1ubiquitin-protein ligase E3C-like
GO:0000209P:protein polyubiquitination
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
DNA Metabolism
SRR953582_primary_scf7180001955312_2269-2796
Len: 527 bp
Hits: 20
E-val: 6.80E-61
Sim: 66.12%
 XP_018952461.1 tRNA-splicing endonuclease subunit Sen34-like
GO:0006388P:tRNA splicing, via endonucleolytic cleavage and ligation
GO:0004519F:endonuclease activity
GO:0016829F:lyase activity
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180001955490_167-1855
Len: 1,688 bp
Hits: 20
E-val: 1.20E-23
Sim: 91.94%
 ABV31710.1transposase
GO:0006313P:DNA transposition
GO:0015074P:DNA integration
GO:0042981P:regulation of apoptotic process
GO:0002039F:p53 binding
GO:0003677F:DNA binding
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180001955735_1153-2890
Len: 1,737 bp
Hits: 20
E-val: 2.60E-56
Sim: 68.4%
 XP_017345541.1 proliferating cell nuclear antigen
GO:0006260P:DNA replication
GO:0006974P:DNA damage response
GO:0009617P:response to bacterium
GO:0014823P:response to activity
GO:0140513C:nuclear protein-containing complex
DNA Metabolism
SRR953582_primary_scf7180001958514_781-1165
Len: 384 bp
Hits: 20
E-val: 6.60E-13
Sim: 89.89%
 XP_026059877.1sister chromatid cohesion protein PDS5 homolog A isoform X1
GO:0006281P:DNA repair
GO:0007064P:mitotic sister chromatid cohesion
GO:0008156P:negative regulation of DNA replication
GO:0051301P:cell division
GO:0000785C:chromatin
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180001958583_780-2802
Len: 2,022 bp
Hits: 20
E-val: 2.30E-16
Sim: 60.95%
 XP_026123400.1piggyBac transposable element-derived protein 4-like isoform X8
GO:0009987P:cellular process
GO:0003677F:DNA binding
GO:0043227C:membrane-bounded organelle
DNA Metabolism
SRR953582_primary_scf7180001959919_1-2134
Len: 2,133 bp
Hits: 20
E-val: 5.20E-51
Sim: 94.31%
 XP_018940061.1 LOW QUALITY PROTEIN: DNA polymerase alpha catalytic subunit-like
GO:0006272P:leading strand elongation
GO:0006273P:lagging strand elongation
GO:0071897P:DNA biosynthetic process
GO:1902975P:mitotic DNA replication initiation
GO:0000166F:nucleotide binding
GO:0003682F:chromatin binding
GO:0003688F:DNA replication origin binding
GO:0003697F:single-stranded DNA binding
GO:0003887F:DNA-directed DNA polymerase activity
GO:0008270F:zinc ion binding
GO:0005658C:alpha DNA polymerase:primase complex
DNA Metabolism
SRR953582_primary_scf7180001959988_224-832
Len: 608 bp
Hits: 20
E-val: 1.70E-108
Sim: 90.29%
 XP_018924785.1 RING finger protein 222-like
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180001960694_886-2347
Len: 1,461 bp
Hits: 20
E-val: 1.20E-38
Sim: 63.51%
 XP_018974246.1 nuclear receptor subfamily 4 group A member 3-like
GO:0050794P:regulation of cellular process
GO:0003677F:DNA binding
DNA Metabolism
SRR953582_primary_scf7180001961807_1-1822
Len: 1,821 bp
Hits: 20
E-val: 7.40E-22
Sim: 98.94%
 RXN21732.1myoferlin isoform X2
GO:0001778P:plasma membrane repair
GO:0006282P:regulation of DNA repair
GO:0007165P:signal transduction
GO:0033292P:T-tubule organization
GO:0061025P:membrane fusion
GO:0004591F:oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0004649F:poly(ADP-ribose) glycohydrolase activity
GO:0030976F:thiamine pyrophosphate binding
GO:0046872F:metal ion binding
GO:0005886C:plasma membrane
GO:0030659C:cytoplasmic vesicle membrane
DNA Metabolism
SRR953582_primary_scf7180001962517_575-1459
Len: 884 bp
Hits: 20
E-val: 8.50E-157
Sim: 93.87%
 XP_018967520.1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like isoform X1
GO:0001966P:thigmotaxis
GO:0006438P:valyl-tRNA aminoacylation
GO:0006487P:protein N-linked glycosylation
GO:0036269P:swimming behavior
GO:0048812P:neuron projection morphogenesis
GO:0060047P:heart contraction
GO:0060297P:regulation of sarcomere organization
GO:0106074P:aminoacyl-tRNA metabolism involved in translational fidelity
GO:0002161F:aminoacyl-tRNA deacylase activity
GO:0003827F:alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0004832F:valine-tRNA ligase activity
GO:0005524F:ATP binding
GO:0030145F:manganese ion binding
GO:0000139C:Golgi membrane
GO:0005739C:mitochondrion
GO:0005829C:cytosol
DNA Metabolism
SRR953582_primary_scf7180001962741_1-1157
Len: 1,156 bp
Hits: 20
E-val: 7.00E-42
Sim: 62.55%
 XP_018930708.1 LOW QUALITY PROTEIN: tetratricopeptide repeat protein 30A-like
GO:0001736P:establishment of planar polarity
GO:0007368P:determination of left/right symmetry
GO:0018095P:protein polyglutamylation
GO:0036372P:opsin transport
GO:0042073P:intraciliary transport
GO:0060271P:cilium assembly
GO:0044877F:protein-containing complex binding
GO:0070738F:tubulin-glycine ligase activity
GO:0005879C:axonemal microtubule
GO:0031514C:motile cilium
DNA Metabolism
SRR953582_primary_scf7180001963536_174-1945
Len: 1,771 bp
Hits: 20
E-val: 2.90E-108
Sim: 96.16%
 XP_018928104.1 E3 ubiquitin-protein ligase TRIM39-like
GO:0045087P:innate immune response
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180001965874_1-974
Len: 973 bp
Hits: 20
E-val: 1.50E-45
Sim: 76.71%
 XP_018948380.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
GO:0003723F:RNA binding
GO:0004386F:helicase activity
GO:0005681C:spliceosomal complex
DNA Metabolism
SRR953582_primary_scf7180001966328_1-2739
Len: 2,738 bp
Hits: 20
E-val: 2.40E-48
Sim: 76.74%
 XP_018937325.1 probable E3 ubiquitin-protein ligase HERC4 isoform X1
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism