Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 32 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR953582_primary_scf7180001968223_866-1504
Len: 638 bp
Hits: 20
E-val: 5.00E-18
Sim: 73.06%
 RXN12459.1E3 ubiquitin-protein ligase RNF115-like protein
GO:0007368P:determination of left/right symmetry
GO:0016567P:protein ubiquitination
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180001969233_14-798
Len: 784 bp
Hits: 20
E-val: 9.80E-48
Sim: 79.16%
 ROI81838.1E3 ubiquitin-protein ligase BRE1B
GO:0006325P:chromatin organization
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0033503C:HULC complex
DNA Metabolism
SRR953582_primary_scf7180001969477_1-1190
Len: 1,189 bp
Hits: 20
E-val: 2.90E-27
Sim: 90.11%
 XP_026126049.15' exonuclease Apollo-like
GO:0006303P:double-strand break repair via nonhomologous end joining
GO:0031627P:telomeric loop formation
GO:0031848P:protection from non-homologous end joining at telomere
GO:0031860P:telomeric 3' overhang formation
GO:0036297P:interstrand cross-link repair
GO:0003684F:damaged DNA binding
GO:0008800F:beta-lactamase activity
GO:0035312F:5'-3' DNA exonuclease activity
GO:0000781C:chromosome, telomeric region
GO:0005634C:nucleus
GO:0005813C:centrosome
DNA Metabolism
SRR953582_primary_scf7180001969978_1-1282
Len: 1,281 bp
Hits: 20
E-val: 1.50E-16
Sim: 97.87%
 XP_003961979.1 ceramide synthase 6
GO:0046513P:ceramide biosynthetic process
GO:0003677F:DNA binding
GO:0050291F:sphingosine N-acyltransferase activity
GO:0005634C:nucleus
GO:0005789C:endoplasmic reticulum membrane
DNA Metabolism
SRR953582_primary_scf7180001970038_448-1858
Len: 1,410 bp
Hits: 20
E-val: 1.70E-45
Sim: 70.4%
 ROL50169.1Acyl-CoA synthetase short-chain family member 3, mitochondrial
GO:0016405F:CoA-ligase activity
GO:0016878F:acid-thiol ligase activity
DNA Metabolism
SRR953582_primary_scf7180001970220_1-1937
Len: 1,936 bp
Hits: 20
E-val: 1.00E-29
Sim: 100%
 XP_026144084.1DNA topoisomerase 2-beta-like isoform X2
GO:0000712P:resolution of meiotic recombination intermediates
GO:0000819P:sister chromatid segregation
GO:0006265P:DNA topological change
GO:0007412P:axon target recognition
GO:0010842P:retina layer formation
GO:0031290P:retinal ganglion cell axon guidance
GO:0048884P:neuromast development
GO:0003677F:DNA binding
GO:0005524F:ATP binding
GO:0034335F:DNA negative supercoiling activity
GO:0046872F:metal ion binding
GO:0005654C:nucleoplasm
GO:0005730C:nucleolus
DNA Metabolism
SRR953582_primary_scf7180001971073_1-216
Len: 215 bp
Hits: 20
E-val: 3.50E-16
Sim: 98.11%
 XP_026084351.1ankyrin repeat and IBR domain-containing protein 1-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180001971506_621-1414
Len: 793 bp
Hits: 20
E-val: 1.50E-96
Sim: 73.9%
 XP_018927448.1 zinc finger protein 84-like
GO:0010468P:regulation of gene expression
GO:0003677F:DNA binding
GO:0110165C:cellular anatomical structure
DNA Metabolism
SRR953582_primary_scf7180001976930_1-1369
Len: 1,368 bp
Hits: 20
E-val: 4.20E-30
Sim: 99.86%
 RXN21371.1spermatid perinuclear RNA-binding -like isoform X4
GO:0007283P:spermatogenesis
GO:0030154P:cell differentiation
GO:0003677F:DNA binding
GO:0003725F:double-stranded RNA binding
GO:0003727F:single-stranded RNA binding
GO:0005737C:cytoplasm
GO:0071011C:precatalytic spliceosome
DNA Metabolism
SRR953582_primary_scf7180001976988_1-1025
Len: 1,024 bp
Hits: 20
E-val: 2.70E-61
Sim: 85.7%
 XP_018933023.1 cullin-4B-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0031625F:ubiquitin protein ligase binding
GO:0031461C:cullin-RING ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180001980863_1-620
Len: 619 bp
Hits: 20
E-val: 4.60E-24
Sim: 98.25%
 NP_957170.1pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
GO:0000398P:mRNA splicing, via spliceosome
GO:0003723F:RNA binding
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
GO:0034458F:3'-5' RNA helicase activity
GO:0005681C:spliceosomal complex
DNA Metabolism
SRR953582_primary_scf7180001987347_1-1218
Len: 1,217 bp
Hits: 20
E-val: 4.30E-50
Sim: 53.48%
 XP_018919116.1 histone PARylation factor 1 isoform X1
GO:0006974P:DNA damage response
GO:0043229C:intracellular organelle
DNA Metabolism
SRR953582_primary_scf7180002003858_1-2406
Len: 2,405 bp
Hits: 20
E-val: 8.80E-39
Sim: 66.27%
 XP_016113692.1 mitogen-activated protein kinase kinase kinase kinase 4-like
GO:0006310P:DNA recombination
GO:0015074P:DNA integration
GO:0003677F:DNA binding
DNA Metabolism
SRR953582_primary_scf7180002003971_1-2104
Len: 2,103 bp
Hits: 20
E-val: 4.70E-230
Sim: 84.1%
 XP_016397733.1 putative nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002004018_1564-1929
Len: 365 bp
Hits: 20
E-val: 2.10E-37
Sim: 71.4%
 RXN26735.1Transposon Ty3-G Gag-Pol poly
GO:0015074P:DNA integration
GO:0003676F:nucleic acid binding
GO:0003824F:catalytic activity
DNA Metabolism
SRR953582_primary_scf7180002004568_3342-4075
Len: 733 bp
Hits: 20
E-val: 1.90E-45
Sim: 83.71%
 RXN20266.1spliceosome RNA helicase DDX39B
GO:0000398P:mRNA splicing, via spliceosome
GO:0006406P:mRNA export from nucleus
GO:0003724F:RNA helicase activity
GO:0003729F:mRNA binding
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
DNA Metabolism
SRR953582_primary_scf7180002004647_3163-5247
Len: 2,084 bp
Hits: 20
E-val: 3.50E-185
Sim: 54.27%
 XP_018930492.1 protein FAM46A-like
GO:0048255P:mRNA stabilization
GO:0003723F:RNA binding
GO:1990817F:poly(A) RNA polymerase activity
GO:0005575C:cellular_component
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002004662_200-2128
Len: 1,928 bp
Hits: 20
E-val: 5.20E-135
Sim: 92.82%
 XP_018936251.1 mitochondrial ubiquitin ligase activator of nfkb 1-A
GO:0000266P:mitochondrial fission
GO:0016567P:protein ubiquitination
GO:0043123P:positive regulation of canonical NF-kappaB signal transduction
GO:0051646P:mitochondrion localization
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0042802F:identical protein binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005741C:mitochondrial outer membrane
GO:0005777C:peroxisome
DNA Metabolism
SRR953582_primary_scf7180002004939_1429-5007
Len: 3,578 bp
Hits: 20
E-val: 0
Sim: 89.05%
 XP_018980297.1 LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1-like
GO:0003677F:DNA binding
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002005295_101-1017
Len: 916 bp
Hits: 20
E-val: 2.00E-15
Sim: 95.91%
 XP_018979415.1 geminin-like isoform X1
GO:0008156P:negative regulation of DNA replication
GO:0045786P:negative regulation of cell cycle
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002005438_1-2715
Len: 2,714 bp
Hits: 20
E-val: 9.60E-26
Sim: 89.36%
 XP_016324779.1 probable arginine--tRNA ligase, mitochondrial
GO:0006420P:arginyl-tRNA aminoacylation
GO:0032543P:mitochondrial translation
GO:0004814F:arginine-tRNA ligase activity
GO:0005524F:ATP binding
GO:0005739C:mitochondrion
DNA Metabolism
SRR953582_primary_scf7180002005837_1-2976
Len: 2,975 bp
Hits: 20
E-val: 6.60E-129
Sim: 86.43%
 XP_026060058.1LON peptidase N-terminal domain and RING finger protein 2-like isoform X2
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002006098_54-4204
Len: 4,150 bp
Hits: 20
E-val: 5.20E-31
Sim: 65.56%
 XP_026070421.1DNA topoisomerase 2-beta-like isoform X1
GO:0006996P:organelle organization
GO:0003916F:DNA topoisomerase activity
GO:0005488F:binding
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002006901_1-2576
Len: 2,575 bp
Hits: 20
E-val: 3.00E-21
Sim: 94.58%
 ROI15930.1DDB1- and CUL4-associated factor 17
GO:0016567P:protein ubiquitination
GO:0005730C:nucleolus
GO:0016020C:membrane
GO:0080008C:Cul4-RING E3 ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180002006945_274-3363
Len: 3,089 bp
Hits: 20
E-val: 4.30E-14
Sim: 91.86%
 CDQ72298.1unnamed protein product
GO:0016081P:synaptic vesicle docking
GO:0016082P:synaptic vesicle priming
GO:0035249P:synaptic transmission, glutamatergic
GO:0061789P:dense core granule priming
GO:0099525P:presynaptic dense core vesicle exocytosis
GO:0003677F:DNA binding
GO:0005509F:calcium ion binding
GO:0005516F:calmodulin binding
GO:0005543F:phospholipid binding
GO:0008270F:zinc ion binding
GO:0017075F:syntaxin-1 binding
GO:0019992F:diacylglycerol binding
GO:0005634C:nucleus
GO:0030672C:synaptic vesicle membrane
GO:0031594C:neuromuscular junction
GO:0042734C:presynaptic membrane
GO:0043195C:terminal bouton
GO:0098831C:presynaptic active zone cytoplasmic component
DNA Metabolism