Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 35 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR953582_primary_scf7180002036342_1-1115
Len: 1,114 bp
Hits: 20
E-val: 1.10E-41
Sim: 60.13%
 XP_016303831.1 PWWP domain-containing protein MUM1L1-like isoform X1
GO:0008150P:biological_process
GO:0003674F:molecular_function
GO:0003677F:DNA binding
GO:0005575C:cellular_component
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002036454_37-1120
Len: 1,083 bp
Hits: 20
E-val: 3.40E-59
Sim: 55.75%
 XP_016106854.1 E1A-binding protein p400-like
GO:0006281P:DNA repair
GO:0006325P:chromatin organization
GO:0003682F:chromatin binding
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
GO:0000812C:Swr1 complex
GO:0005634C:nucleus
GO:0005654C:nucleoplasm
GO:0035267C:NuA4 histone acetyltransferase complex
DNA Metabolism
SRR953582_primary_scf7180002037085_1-1639
Len: 1,638 bp
Hits: 20
E-val: 1.60E-52
Sim: 56.54%
 ROL47384.1putative E3 ubiquitin-protein ligase HERC1
GO:0004842F:ubiquitin-protein transferase activity
GO:0016874F:ligase activity
DNA Metabolism
SRR953582_primary_scf7180002038058_1-661
Len: 660 bp
Hits: 20
E-val: 2.20E-16
Sim: 75.5%
 XP_026140185.1ankyrin repeat and IBR domain-containing protein 1-like isoform X1
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002039315_1-1066
Len: 1,065 bp
Hits: 20
E-val: 1.80E-12
Sim: 81.56%
 XP_018941401.1 RING finger protein 145-like
GO:0036503P:ERAD pathway
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061515P:myeloid cell development
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0012505C:endomembrane system
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002039559_1-1758
Len: 1,757 bp
Hits: 20
E-val: 5.30E-25
Sim: 71.47%
 XP_026127225.1PMS1 protein homolog 1
GO:0006298P:mismatch repair
GO:0003677F:DNA binding
GO:0016887F:ATP hydrolysis activity
GO:0032389C:MutLalpha complex
DNA Metabolism
SRR953582_primary_scf7180002040448_1-1542
Len: 1,541 bp
Hits: 20
E-val: 9.60E-23
Sim: 95.73%
 XP_026070444.1protein angel homolog 2-like isoform X1
GO:0070935P:3'-UTR-mediated mRNA stabilization
GO:0000175F:3'-5'-RNA exonuclease activity
GO:0003730F:mRNA 3'-UTR binding
DNA Metabolism
SRR953582_primary_scf7180002040624_1-1602
Len: 1,601 bp
Hits: 20
E-val: 2.40E-85
Sim: 70.81%
 XP_026109832.1retinoic acid receptor alpha-B-like
GO:0050794P:regulation of cellular process
GO:0051716P:cellular response to stimulus
GO:0003677F:DNA binding
DNA Metabolism
SRR953582_primary_scf7180002041350_1-2170
Len: 2,169 bp
Hits: 20
E-val: 1.10E-19
Sim: 90.23%
 XP_016129791.1 lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma-like
GO:0003677F:DNA binding
GO:0005635C:nuclear envelope
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002045012_1-1781
Len: 1,780 bp
Hits: 20
E-val: 4.00E-28
Sim: 86.46%
 XP_016326670.1 DNA primase large subunit-like
GO:0006269P:DNA replication, synthesis of primer
GO:0006270P:DNA replication initiation
GO:0003677F:DNA binding
GO:0046872F:metal ion binding
GO:0051539F:4 iron, 4 sulfur cluster binding
GO:0005658C:alpha DNA polymerase:primase complex
DNA Metabolism
SRR953582_primary_scf7180002045892_1-1662
Len: 1,661 bp
Hits: 20
E-val: 6.50E-25
Sim: 74.95%
 XP_018943736.1 DNA topoisomerase 1-like, partial
GO:0006260P:DNA replication
GO:0006265P:DNA topological change
GO:0007059P:chromosome segregation
GO:0048511P:rhythmic process
GO:0003677F:DNA binding
GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0005694C:chromosome
GO:0005730C:nucleolus
DNA Metabolism
SRR953582_primary_scf7180002046239_1-1263
Len: 1,262 bp
Hits: 20
E-val: 7.10E-32
Sim: 55.53%
 XP_016119818.1 chromodomain-helicase-DNA-binding protein 4-like, partial
GO:0004386F:helicase activity
GO:0005488F:binding
GO:0008094F:ATP-dependent activity, acting on DNA
GO:0016787F:hydrolase activity
DNA Metabolism
SRR953582_primary_scf7180002048581_247-1668
Len: 1,421 bp
Hits: 20
E-val: 2.60E-70
Sim: 52.74%
 XP_026060874.1DDB1- and CUL4-associated factor 8-like
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0080008C:Cul4-RING E3 ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180002048774_331-1440
Len: 1,109 bp
Hits: 20
E-val: 2.10E-48
Sim: 78.48%
 XP_026142639.1LOW QUALITY PROTEIN: phosphatidylinositol phosphatase PTPRQ-like
GO:0006338P:chromatin remodeling
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002049638_1-1296
Len: 1,295 bp
Hits: 20
E-val: 3.20E-35
Sim: 98.27%
 XP_018966825.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin-like
GO:0016567P:protein ubiquitination
GO:0072344P:rescue of stalled ribosome
GO:1990116P:ribosome-associated ubiquitin-dependent protein catabolic process
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0043023F:ribosomal large subunit binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005829C:cytosol
GO:1990112C:RQC complex
DNA Metabolism
SRR953582_primary_scf7180002052769_1-1225
Len: 1,224 bp
Hits: 20
E-val: 7.20E-21
Sim: 98.56%
 XP_026140430.1cohesin subunit SA-1
GO:0007059P:chromosome segregation
GO:0007062P:sister chromatid cohesion
GO:0051301P:cell division
GO:0003682F:chromatin binding
GO:0000775C:chromosome, centromeric region
GO:0000785C:chromatin
GO:0005634C:nucleus
GO:0008278C:cohesin complex
DNA Metabolism
SRR953582_primary_scf7180002052776_1-1101
Len: 1,100 bp
Hits: 20
E-val: 2.10E-35
Sim: 70.54%
 XP_016334523.1 protein polybromo-1-like isoform X1
GO:0006325P:chromatin organization
GO:0005488F:binding
GO:0070603C:SWI/SNF superfamily-type complex
DNA Metabolism
SRR953582_primary_scf7180002053260_1-1420
Len: 1,419 bp
Hits: 20
E-val: 3.20E-89
Sim: 61.92%
 XP_026128916.1chromodomain-helicase-DNA-binding protein 1-like isoform X1
GO:0003678F:DNA helicase activity
GO:0005488F:binding
DNA Metabolism
SRR953582_primary_scf7180002053746_1-783
Len: 782 bp
Hits: 20
E-val: 2.60E-16
Sim: 93.64%
 XP_026056864.1DDB1- and CUL4-associated factor 11-like
GO:0016567P:protein ubiquitination
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0080008C:Cul4-RING E3 ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180002054275_699-1606
Len: 907 bp
Hits: 20
E-val: 2.50E-42
Sim: 64.18%
 XP_018951025.1 high mobility group-T protein-like
GO:0009987P:cellular process
GO:0003677F:DNA binding
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002056697_1-1089
Len: 1,088 bp
Hits: 20
E-val: 1.20E-24
Sim: 66.07%
 XP_016118949.1 phenylalanine--tRNA ligase beta subunit-like, partial
GO:0006432P:phenylalanyl-tRNA aminoacylation
GO:0000287F:magnesium ion binding
GO:0003723F:RNA binding
GO:0004826F:phenylalanine-tRNA ligase activity
GO:0005524F:ATP binding
GO:0009328C:phenylalanine-tRNA ligase complex
DNA Metabolism
SRR953582_primary_scf7180002057340_830-1350
Len: 520 bp
Hits: 20
E-val: 1.20E-38
Sim: 94.38%
 RXN22584.1DNA ligase 3
GO:0006273P:lagging strand elongation
GO:0006310P:DNA recombination
GO:0071897P:DNA biosynthetic process
GO:0097681P:double-strand break repair via alternative nonhomologous end joining
GO:0003677F:DNA binding
GO:0003910F:DNA ligase (ATP) activity
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0070421C:DNA ligase III-XRCC1 complex
DNA Metabolism
SRR953582_primary_scf7180002058331_1-1410
Len: 1,409 bp
Hits: 20
E-val: 8.30E-13
Sim: 96.03%
 XP_026074274.1E3 ubiquitin-protein ligase MYCBP2-like isoform X10
GO:0008582P:regulation of synaptic assembly at neuromuscular junction
GO:0016198P:axon choice point recognition
GO:0016567P:protein ubiquitination
GO:0021952P:central nervous system projection neuron axonogenesis
GO:0021986P:habenula development
GO:0031290P:retinal ganglion cell axon guidance
GO:0032922P:circadian regulation of gene expression
GO:0048066P:developmental pigmentation
GO:0048677P:axon extension involved in regeneration
GO:0050905P:neuromuscular process
GO:1902667P:regulation of axon guidance
GO:0005085F:guanyl-nucleotide exchange factor activity
GO:0008270F:zinc ion binding
GO:0031267F:small GTPase binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
GO:0005856C:cytoskeleton
GO:0005886C:plasma membrane
GO:0030424C:axon
DNA Metabolism
SRR953582_primary_scf7180002059728_1-837
Len: 836 bp
Hits: 20
E-val: 9.50E-49
Sim: 90.05%
 XP_018921628.1 LOW QUALITY PROTEIN: EMILIN-2-like, partial
GO:0006302P:double-strand break repair
GO:0051276P:chromosome organization
GO:0005524F:ATP binding
GO:0005576C:extracellular region
GO:0005694C:chromosome
DNA Metabolism
SRR953582_primary_scf7180002059806_1-1442
Len: 1,441 bp
Hits: 20
E-val: 2.70E-43
Sim: 68.56%
 XP_018965540.1 ATP-dependent RNA helicase DHX29
GO:0003723F:RNA binding
GO:0004386F:helicase activity
GO:0016787F:hydrolase activity
DNA Metabolism