Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 37 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR953582_primary_scf7180002152768_212-1516
Len: 1,304 bp
Hits: 20
E-val: 3.40E-77
Sim: 78.17%
 RXN22044.1reverse transcriptase
GO:0006278P:RNA-templated DNA biosynthetic process
GO:0003964F:RNA-directed DNA polymerase activity
DNA Metabolism
SRR953582_primary_scf7180002152853_660-3027
Len: 2,367 bp
Hits: 20
E-val: 5.40E-73
Sim: 72.58%
 XP_018927329.1 LOW QUALITY PROTEIN: DNA replication licensing factor MCM6-like
GO:0000727P:double-strand break repair via break-induced replication
GO:1902969P:mitotic DNA replication
GO:0003697F:single-stranded DNA binding
GO:0016787F:hydrolase activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0005634C:nucleus
GO:0042555C:MCM complex
DNA Metabolism
SRR953582_primary_scf7180002152987_1-2902
Len: 2,901 bp
Hits: 20
E-val: 5.50E-35
Sim: 57.48%
 XP_018923937.1 lysine-specific demethylase 7A-like
GO:0006325P:chromatin organization
GO:0008270F:zinc ion binding
GO:0016706F:2-oxoglutarate-dependent dioxygenase activity
GO:0141052F:histone H3 demethylase activity
GO:0005634C:nucleus
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002152995_1002-3130
Len: 2,128 bp
Hits: 20
E-val: 2.90E-33
Sim: 97.98%
 XP_016118709.1 protein arginine N-methyltransferase 3-like
GO:0006338P:chromatin remodeling
GO:0032259P:methylation
GO:0016274F:protein-arginine N-methyltransferase activity
GO:0042054F:histone methyltransferase activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002153168_1149-2688
Len: 1,539 bp
Hits: 20
E-val: 2.50E-47
Sim: 94.64%
 XP_018974660.1 LOW QUALITY PROTEIN: N-acetyltransferase 14-like
GO:0016444P:somatic cell DNA recombination
GO:0016554P:cytidine to uridine editing
GO:0003723F:RNA binding
GO:0004126F:cytidine deaminase activity
GO:0008270F:zinc ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002153422_3413-3966
Len: 553 bp
Hits: 20
E-val: 1.50E-18
Sim: 65.06%
 XP_026073609.1lysine-specific demethylase 6A-like isoform X1
GO:0007420P:brain development
GO:0008354P:germ cell migration
GO:0048703P:embryonic viscerocranium morphogenesis
GO:0060027P:convergent extension involved in gastrulation
GO:0060324P:face development
GO:0003677F:DNA binding
GO:0032452F:histone demethylase activity
GO:0051213F:dioxygenase activity
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002155513_1-1982
Len: 1,981 bp
Hits: 20
E-val: 2.90E-32
Sim: 91.86%
 XP_026144746.1kelch-like protein 38
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1990756F:ubiquitin-like ligase-substrate adaptor activity
GO:0005737C:cytoplasm
GO:0031463C:Cul3-RING ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180002155801_1-2527
Len: 2,526 bp
Hits: 20
E-val: 8.30E-56
Sim: 60.82%
 XP_018919498.1 structural maintenance of chromosomes protein 2-like
GO:0001889P:liver development
GO:0006974P:DNA damage response
GO:0007076P:mitotic chromosome condensation
GO:0051301P:cell division
GO:0003682F:chromatin binding
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
GO:0000785C:chromatin
GO:0000793C:condensed chromosome
GO:0000796C:condensin complex
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002155822_1688-3165
Len: 1,477 bp
Hits: 20
E-val: 2.80E-43
Sim: 97.72%
 XP_016125710.1 E3 ubiquitin-protein ligase arih1-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
GO:0016604C:nuclear body
GO:0019005C:SCF ubiquitin ligase complex
GO:0031462C:Cul2-RING ubiquitin ligase complex
GO:0031463C:Cul3-RING ubiquitin ligase complex
GO:0031464C:Cul4A-RING E3 ubiquitin ligase complex
GO:0097413C:Lewy body
DNA Metabolism
SRR953582_primary_scf7180002157064_1-3604
Len: 3,603 bp
Hits: 20
E-val: 4.80E-49
Sim: 100%
 XP_026096839.1receptor-type tyrosine-protein phosphatase U-like isoform X2
GO:0006338P:chromatin remodeling
GO:0007165P:signal transduction
GO:0031175P:neuron projection development
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002157268_1-560
Len: 559 bp
Hits: 20
E-val: 3.10E-88
Sim: 97.3%
 XP_026076986.1kelch repeat and BTB domain-containing protein 8-like
GO:0006417P:regulation of translation
GO:0006513P:protein monoubiquitination
GO:0014029P:neural crest formation
GO:0014032P:neural crest cell development
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:1990756F:ubiquitin-like ligase-substrate adaptor activity
GO:0005794C:Golgi apparatus
GO:0005819C:spindle
GO:0016020C:membrane
GO:0031463C:Cul3-RING ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180002158077_1-1989
Len: 1,988 bp
Hits: 20
E-val: 5.50E-204
Sim: 93.94%
 XP_018918835.1 kelch-like protein 40b
GO:0031398P:positive regulation of protein ubiquitination
GO:0032436P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036268P:swimming
GO:0048741P:skeletal muscle fiber development
GO:0098528P:skeletal muscle fiber differentiation
GO:1990756F:ubiquitin-like ligase-substrate adaptor activity
GO:0031463C:Cul3-RING ubiquitin ligase complex
GO:0031672C:A band
GO:0031674C:I band
DNA Metabolism
SRR953582_primary_scf7180002158106_1-3243
Len: 3,242 bp
Hits: 20
E-val: 1.10E-140
Sim: 53.04%
 XP_018929359.1 AF4/FMR2 family member 4-like
GO:0007366P:periodic partitioning by pair rule gene
GO:0010468P:regulation of gene expression
GO:0003677F:DNA binding
GO:0005634C:nucleus
GO:0032783C:super elongation complex
DNA Metabolism
SRR953582_primary_scf7180002158564_1-1170
Len: 1,169 bp
Hits: 20
E-val: 3.10E-98
Sim: 71.64%
 XP_018955798.1 LOW QUALITY PROTEIN: MCM domain-containing protein 2-like
GO:0000727P:double-strand break repair via break-induced replication
GO:0005488F:binding
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002158701_884-1462
Len: 578 bp
Hits: 20
E-val: 2.70E-87
Sim: 84.62%
 RXN07062.1zinc finger BED domain-containing 1-like protein
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002158931_1-2559
Len: 2,558 bp
Hits: 20
E-val: 2.20E-32
Sim: 95.97%
 XP_016130056.1 DNA annealing helicase and endonuclease ZRANB3
GO:0006281P:DNA repair
GO:0031297P:replication fork processing
GO:2000674P:regulation of type B pancreatic cell apoptotic process
GO:0003676F:nucleic acid binding
GO:0004386F:helicase activity
GO:0004520F:DNA endonuclease activity
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0016787F:hydrolase activity
GO:0043596C:nuclear replication fork
DNA Metabolism
SRR953582_primary_scf7180002159336_1-3603
Len: 3,602 bp
Hits: 20
E-val: 1.80E-43
Sim: 71.78%
 CAF96867.1unnamed protein product, partial
GO:0006260P:DNA replication
GO:0006265P:DNA topological change
GO:0007059P:chromosome segregation
GO:0048511P:rhythmic process
GO:0003677F:DNA binding
GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0005694C:chromosome
GO:0005730C:nucleolus
DNA Metabolism
SRR953582_primary_scf7180002159529_1-3297
Len: 3,296 bp
Hits: 20
E-val: 2.90E-48
Sim: 67.3%
 XP_018957141.1 DNA repair protein RAD50
GO:0000722P:telomere maintenance via recombination
GO:0006302P:double-strand break repair
GO:0007004P:telomere maintenance via telomerase
GO:0070192P:chromosome organization involved in meiotic cell cycle
GO:0003691F:double-stranded telomeric DNA binding
GO:0043047F:single-stranded telomeric DNA binding
GO:0051880F:G-quadruplex DNA binding
GO:0000794C:condensed nuclear chromosome
GO:0030870C:Mre11 complex
DNA Metabolism
SRR953582_primary_scf7180002159604_1-2222
Len: 2,221 bp
Hits: 20
E-val: 4.00E-30
Sim: 86.77%
 XP_016131081.1 centriolin-like
GO:0007076P:mitotic chromosome condensation
GO:0003682F:chromatin binding
GO:0000785C:chromatin
GO:0000793C:condensed chromosome
GO:0000796C:condensin complex
DNA Metabolism
SRR953582_primary_scf7180002160147_1-1074
Len: 1,073 bp
Hits: 20
E-val: 3.80E-34
Sim: 99.41%
 XP_026140356.1ras-related protein Rab-3A-like
GO:0003016P:respiratory system process
GO:0006886P:intracellular protein transport
GO:0007005P:mitochondrion organization
GO:0007274P:neuromuscular synaptic transmission
GO:0007409P:axonogenesis
GO:0009791P:post-embryonic development
GO:0016188P:synaptic vesicle maturation
GO:0030073P:insulin secretion
GO:0030324P:lung development
GO:0031630P:regulation of synaptic vesicle fusion to presynaptic active zone membrane
GO:0032418P:lysosome localization
GO:0048172P:regulation of short-term neuronal synaptic plasticity
GO:0048489P:synaptic vesicle transport
GO:0048790P:maintenance of presynaptic active zone structure
GO:0050975P:sensory perception of touch
GO:0051602P:response to electrical stimulus
GO:0060478P:acrosomal vesicle exocytosis
GO:0061670P:evoked neurotransmitter secretion
GO:0097091P:synaptic vesicle clustering
GO:0099161P:regulation of presynaptic dense core granule exocytosis
GO:1903307P:positive regulation of regulated secretory pathway
GO:1905684P:regulation of plasma membrane repair
GO:0003924F:GTPase activity
GO:0005525F:GTP binding
GO:0030674F:protein-macromolecule adaptor activity
GO:0030742F:GTP-dependent protein binding
GO:0031489F:myosin V binding
GO:0001669C:acrosomal vesicle
GO:0005768C:endosome
GO:0005886C:plasma membrane
GO:0030672C:synaptic vesicle membrane
GO:0043195C:terminal bouton
GO:0048471C:perinuclear region of cytoplasm
GO:0048786C:presynaptic active zone
GO:0098794C:postsynapse
DNA Metabolism
SRR953582_primary_scf7180002160649_1-2933
Len: 2,932 bp
Hits: 20
E-val: 1.20E-18
Sim: 91.02%
 XP_016117476.1 zinc phosphodiesterase ELAC protein 2-like
GO:1990180P:mitochondrial tRNA 3'-end processing
GO:0042781F:3'-tRNA processing endoribonuclease activity
GO:0046872F:metal ion binding
GO:0042645C:mitochondrial nucleoid
DNA Metabolism
SRR953582_primary_scf7180002161815_1845-2111
Len: 266 bp
Hits: 20
E-val: 2.00E-37
Sim: 99.69%
 XP_026068963.1TAR DNA-binding protein 43-like
GO:0006338P:chromatin remodeling
GO:0006397P:mRNA processing
GO:0008380P:RNA splicing
GO:0010468P:regulation of gene expression
GO:0003677F:DNA binding
GO:0003723F:RNA binding
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0000785C:chromatin
GO:0005654C:nucleoplasm
GO:0005739C:mitochondrion
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002162833_1-675
Len: 674 bp
Hits: 20
E-val: 7.90E-46
Sim: 89.77%
 XP_018937541.1 LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 5-like
GO:0006782P:protoporphyrinogen IX biosynthetic process
GO:0010824P:regulation of centrosome duplication
GO:0016567P:protein ubiquitination
GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0004655F:porphobilinogen synthase activity
GO:0046872F:metal ion binding
GO:0005737C:cytoplasm
GO:0019005C:SCF ubiquitin ligase complex
GO:0080008C:Cul4-RING E3 ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180002164208_188-2256
Len: 2,068 bp
Hits: 20
E-val: 9.00E-24
Sim: 92.87%
 ROI81838.1E3 ubiquitin-protein ligase BRE1B
GO:0006325P:chromatin organization
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005634C:nucleus
GO:0016020C:membrane
GO:0033503C:HULC complex
DNA Metabolism
SRR953582_primary_scf7180002164223_1-1258
Len: 1,257 bp
Hits: 20
E-val: 2.00E-42
Sim: 50.35%
 XP_018951915.1 LOW QUALITY PROTEIN: acetyl-CoA carboxylase-like, partial
GO:0006633P:fatty acid biosynthetic process
GO:2001295P:malonyl-CoA biosynthetic process
GO:0003989F:acetyl-CoA carboxylase activity
GO:0005524F:ATP binding
GO:0016874F:ligase activity
GO:0046872F:metal ion binding
GO:0005737C:cytoplasm
GO:0005739C:mitochondrion
DNA Metabolism