Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002164738_1700-2605
Len: 905 bp
Hits: 20
E-val: 3.90E-16
Sim: 99.14%
|
ROK28200.1Amyloid protein-binding protein 2 |
GO:0006886P:intracellular protein transport GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:1990756F:ubiquitin-like ligase-substrate adaptor activity GO:0031462C:Cul2-RING ubiquitin ligase complex |
DNA Metabolism
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SRR953582_primary_scf7180002165050_1-1599
Len: 1,598 bp
Hits: 20
E-val: 5.00E-22
Sim: 97.9%
|
XP_018981435.1 DNA damage-binding protein 1-like |
GO:0006281P:DNA repair GO:0016567P:protein ubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0003676F:nucleic acid binding GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180002165913_54-1622
Len: 1,568 bp
Hits: 20
E-val: 2.00E-297
Sim: 85.9%
|
XP_016365833.1 piggyBac transposable element-derived protein 4-like |
GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0030527F:structural constituent of chromatin GO:0046982F:protein heterodimerization activity GO:0000786C:nucleosome GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180002166397_256-1791
Len: 1,535 bp
Hits: 20
E-val: 3.10E-21
Sim: 86.91%
|
XP_016110372.1 coiled-coil domain-containing protein 148-like |
GO:0003676F:nucleic acid binding GO:0004519F:endonuclease activity GO:0016787F:hydrolase activity GO:0046872F:metal ion binding |
DNA Metabolism
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SRR953582_primary_scf7180002166738_1-1346
Len: 1,345 bp
Hits: 20
E-val: 5.50E-248
Sim: 81.21%
|
XP_018947606.1 LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C |
GO:0003729F:mRNA binding GO:0004521F:RNA endonuclease activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0036464C:cytoplasmic ribonucleoprotein granule |
DNA Metabolism
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SRR953582_primary_scf7180002168535_1-2164
Len: 2,163 bp
Hits: 20
E-val: 5.70E-13
Sim: 100%
|
XP_026086853.1E3 ubiquitin-protein ligase TRIP12-like isoform X1 |
GO:0000209P:protein polyubiquitination GO:0006281P:DNA repair GO:0033696P:heterochromatin boundary formation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0045995P:regulation of embryonic development GO:0140861P:DNA repair-dependent chromatin remodeling GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0016607C:nuclear speck |
DNA Metabolism
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SRR953582_primary_scf7180002169703_1-2001
Len: 2,000 bp
Hits: 20
E-val: 6.60E-24
Sim: 66.89%
|
XP_018963733.1 tyrosine-protein phosphatase non-receptor type 13-like |
GO:0003677F:DNA binding GO:0008270F:zinc ion binding |
DNA Metabolism
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SRR953582_primary_scf7180002170561_1-1920
Len: 1,919 bp
Hits: 20
E-val: 2.70E-54
Sim: 70.71%
|
XP_018971704.1 CCR4-NOT transcription complex subunit 6-like |
GO:0000175F:3'-5'-RNA exonuclease activity GO:0005622C:intracellular anatomical structure |
DNA Metabolism
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SRR953582_primary_scf7180002171010_1-1463
Len: 1,462 bp
Hits: 20
E-val: 1.10E-44
Sim: 57.56%
|
XP_016320620.1 short transient receptor potential channel 4-associated protein-like |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0019902F:phosphatase binding GO:0031464C:Cul4A-RING E3 ubiquitin ligase complex |
DNA Metabolism
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SRR953582_primary_scf7180002171497_1171-1834
Len: 663 bp
Hits: 20
E-val: 6.70E-106
Sim: 90.1%
|
XP_018978867.1 E3 ubiquitin-protein ligase Mdm2 isoform X1 |
GO:0010468P:regulation of gene expression GO:0016567P:protein ubiquitination GO:0043066P:negative regulation of apoptotic process GO:0051726P:regulation of cell cycle GO:0065008P:regulation of biological quality GO:0002039F:p53 binding GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0042802F:identical protein binding GO:0061630F:ubiquitin protein ligase activity GO:0005654C:nucleoplasm GO:0005730C:nucleolus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180002174709_1-821
Len: 820 bp
Hits: 20
E-val: 2.30E-23
Sim: 75.56%
|
XP_026145002.1chromodomain-helicase-DNA-binding protein 4-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0031101P:fin regeneration GO:0003677F:DNA binding GO:0003678F:DNA helicase activity GO:0003682F:chromatin binding GO:0016887F:ATP hydrolysis activity GO:0042393F:histone binding GO:0043167F:ion binding GO:0140658F:ATP-dependent chromatin remodeler activity GO:0016581C:NuRD complex |
DNA Metabolism
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SRR953582_primary_scf7180002175181_128-1775
Len: 1,647 bp
Hits: 20
E-val: 2.80E-84
Sim: 51.3%
|
XP_018975849.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X1 |
GO:0002088P:lens development in camera-type eye GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0005681C:spliceosomal complex |
DNA Metabolism
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SRR953582_primary_scf7180002175394_821-1997
Len: 1,176 bp
Hits: 20
E-val: 1.10E-37
Sim: 97.09%
|
XP_016146157.1 LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like |
GO:0000278P:mitotic cell cycle GO:0006272P:leading strand elongation GO:0006287P:base-excision repair, gap-filling GO:0006297P:nucleotide-excision repair, DNA gap filling GO:0045004P:DNA replication proofreading GO:0071897P:DNA biosynthetic process GO:0000166F:nucleotide binding GO:0003677F:DNA binding GO:0003887F:DNA-directed DNA polymerase activity GO:0008270F:zinc ion binding GO:0008310F:single-stranded DNA 3'-5' DNA exonuclease activity GO:0051539F:4 iron, 4 sulfur cluster binding GO:0008622C:epsilon DNA polymerase complex |
DNA Metabolism
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SRR953582_primary_scf7180002175666_1-2079
Len: 2,078 bp
Hits: 20
E-val: 1.20E-23
Sim: 98.07%
|
XP_016345661.1 basic leucine zipper and W2 domain-containing protein 2-like |
GO:0006260P:DNA replication GO:0006325P:chromatin organization GO:0006446P:regulation of translational initiation GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180002175993_1386-1901
Len: 515 bp
Hits: 20
E-val: 2.60E-89
Sim: 87.82%
|
XP_018927641.1 nuclear factor 7, ovary-like |
GO:0045087P:innate immune response GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180002176610_1-1695
Len: 1,694 bp
Hits: 20
E-val: 6.00E-26
Sim: 98.26%
|
CDQ81846.1unnamed protein product |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180002176867_1-1702
Len: 1,701 bp
Hits: 20
E-val: 6.30E-23
Sim: 86.58%
|
XP_018980761.1 ankyrin repeat and BTB/POZ domain-containing protein 1-like |
GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180002177980_1-1633
Len: 1,632 bp
Hits: 20
E-val: 1.10E-37
Sim: 100%
|
XP_026070928.1chromodomain-helicase-DNA-binding protein 9-like isoform X8 |
GO:0006325P:chromatin organization GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180002180514_1-1176
Len: 1,175 bp
Hits: 20
E-val: 6.30E-123
Sim: 92.53%
|
XP_018918312.1 LOW QUALITY PROTEIN: calcineurin-binding protein cabin-1-like, partial |
GO:0006281P:DNA repair GO:0006325P:chromatin organization GO:0031491F:nucleosome binding GO:0005634C:nucleus GO:0005694C:chromosome |
DNA Metabolism
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SRR953582_primary_scf7180002180529_1-1602
Len: 1,601 bp
Hits: 20
E-val: 3.90E-51
Sim: 95.32%
|
XP_018980714.1 helicase SKI2W-like |
GO:0070478P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay GO:0003723F:RNA binding GO:0003724F:RNA helicase activity GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0055087C:Ski complex |
DNA Metabolism
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SRR953582_primary_scf7180002180560_361-1390
Len: 1,029 bp
Hits: 20
E-val: 2.10E-18
Sim: 91.16%
|
XP_026098358.1WD repeat and HMG-box DNA-binding protein 1 |
GO:0000278P:mitotic cell cycle GO:0006261P:DNA-templated DNA replication GO:0006281P:DNA repair GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0043596C:nuclear replication fork |
DNA Metabolism
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SRR953582_primary_scf7180002180616_1-1257
Len: 1,256 bp
Hits: 20
E-val: 1.80E-181
Sim: 69.5%
|
XP_018918430.1 DNA polymerase kappa-like |
GO:0006281P:DNA repair GO:0042276P:error-prone translesion synthesis GO:0003684F:damaged DNA binding GO:0003887F:DNA-directed DNA polymerase activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180002180999_1-1000
Len: 999 bp
Hits: 20
E-val: 2.30E-17
Sim: 82.99%
|
XP_016295260.1 receptor-type tyrosine-protein phosphatase kappa-like |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180002182039_743-1414
Len: 671 bp
Hits: 20
E-val: 3.70E-120
Sim: 86.4%
|
XP_018973751.1 ribonuclease P protein subunit p25-like protein |
GO:0001682P:tRNA 5'-leader removal GO:0003723F:RNA binding GO:0000172C:ribonuclease MRP complex GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180002182222_1-915
Len: 914 bp
Hits: 20
E-val: 2.30E-11
Sim: 99.77%
|
CDQ88898.1unnamed protein product |
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0097039P:protein linear polyubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0043130F:ubiquitin binding GO:0000151C:ubiquitin ligase complex GO:0016020C:membrane |
DNA Metabolism
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