Gene Function: DNA Metabolism

Functional and statistical data for significant genes

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Showing 1,023 results (Page 39 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR953582_primary_scf7180002182788_350-1564
Len: 1,214 bp
Hits: 20
E-val: 1.50E-23
Sim: 83.89%
 XP_018975345.1 LOW QUALITY PROTEIN: integrin alpha-10-like
GO:0007399P:nervous system development
GO:0003676F:nucleic acid binding
GO:0004386F:helicase activity
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
DNA Metabolism
SRR953582_primary_scf7180002184394_1-2171
Len: 2,170 bp
Hits: 20
E-val: 8.00E-31
Sim: 67.39%
 XP_016391663.1 structural maintenance of chromosomes protein 5-like
GO:0006302P:double-strand break repair
GO:0006310P:DNA recombination
GO:0060536P:cartilage morphogenesis
GO:1904748P:regulation of apoptotic process involved in development
GO:0005488F:binding
GO:0005694C:chromosome
DNA Metabolism
SRR953582_primary_scf7180002184769_1-1838
Len: 1,837 bp
Hits: 20
E-val: 7.50E-22
Sim: 98.85%
 XP_013999805.1 receptor-type tyrosine-protein phosphatase kappa isoform X4
GO:0006338P:chromatin remodeling
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002185037_934-1263
Len: 329 bp
Hits: 20
E-val: 6.40E-33
Sim: 99.93%
 XP_026782461.1JNK1/MAPK8-associated membrane protein
GO:0006986P:response to unfolded protein
GO:0036503P:ERAD pathway
GO:0031625F:ubiquitin protein ligase binding
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002185641_96-645
Len: 549 bp
Hits: 20
E-val: 4.30E-26
Sim: 62.69%
 XP_026133983.1LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like
GO:0006974P:DNA damage response
GO:0009411P:response to UV
GO:0003824F:catalytic activity
DNA Metabolism
SRR953582_primary_scf7180002186125_1-1630
Len: 1,629 bp
Hits: 20
E-val: 9.80E-42
Sim: 85.68%
 XP_018924932.1 aprataxin-like
GO:0000012P:single strand break repair
GO:0003697F:single-stranded DNA binding
GO:0003725F:double-stranded RNA binding
GO:0008270F:zinc ion binding
GO:0030983F:mismatched DNA binding
GO:0033699F:DNA 5'-adenosine monophosphate hydrolase activity
GO:0120108F:DNA-3'-diphospho-5'-guanosine diphosphatase activity
GO:1990165F:single-strand break-containing DNA binding
GO:0005654C:nucleoplasm
GO:0005730C:nucleolus
DNA Metabolism
SRR953582_primary_scf7180002186353_1-1592
Len: 1,591 bp
Hits: 20
E-val: 2.50E-18
Sim: 98.04%
 XP_026072356.1chromodomain-helicase-DNA-binding protein 3-like isoform X2
GO:0006338P:chromatin remodeling
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0009378F:four-way junction helicase activity
GO:0016887F:ATP hydrolysis activity
GO:0036121F:double-stranded DNA helicase activity
GO:0042393F:histone binding
GO:0061749F:forked DNA-dependent helicase activity
GO:0140658F:ATP-dependent chromatin remodeler activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0016581C:NuRD complex
DNA Metabolism
SRR953582_primary_scf7180002186611_1-1121
Len: 1,120 bp
Hits: 20
E-val: 2.40E-55
Sim: 50.36%
 XP_016099203.1 cullin-9-like
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0016740F:transferase activity
GO:0031625F:ubiquitin protein ligase binding
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002186626_387-1533
Len: 1,146 bp
Hits: 20
E-val: 3.30E-76
Sim: 89.64%
 XP_018977658.1 leucine-rich repeat and transmembrane domain-containing protein 2-like
GO:0006313P:DNA transposition
GO:0007165P:signal transduction
GO:0015074P:DNA integration
GO:0051781P:positive regulation of cell division
GO:0003677F:DNA binding
GO:0008083F:growth factor activity
GO:0008201F:heparin binding
GO:0005576C:extracellular region
GO:0005886C:plasma membrane
DNA Metabolism
SRR953582_primary_scf7180002187289_1-1201
Len: 1,200 bp
Hits: 20
E-val: 4.40E-15
Sim: 82.39%
 RXN29016.1tyrosine- phosphatase non-receptor type 4-like protein
GO:0006338P:chromatin remodeling
GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity
GO:0008092F:cytoskeletal protein binding
GO:0030946F:protein tyrosine phosphatase activity, metal-dependent
GO:0140793F:histone H2AXY142 phosphatase activity
GO:0005737C:cytoplasm
GO:0005856C:cytoskeleton
GO:0009898C:cytoplasmic side of plasma membrane
DNA Metabolism
SRR953582_primary_scf7180002189395_1-1989
Len: 1,988 bp
Hits: 20
E-val: 1.70E-27
Sim: 87.01%
 XP_026015579.1E3 ubiquitin-protein ligase HERC2-like isoform X2
GO:0016567P:protein ubiquitination
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002189532_1225-1522
Len: 297 bp
Hits: 20
E-val: 2.40E-07
Sim: 87.07%
 XP_016417691.1 biotin--protein ligase
GO:0036211P:protein modification process
GO:0004077F:biotin--[biotin carboxyl-carrier protein] ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002189644_1-1315
Len: 1,314 bp
Hits: 20
E-val: 2.00E-32
Sim: 60.82%
 XP_018976499.1 structural maintenance of chromosomes protein 6-like
GO:0006281P:DNA repair
GO:0005488F:binding
GO:0005694C:chromosome
DNA Metabolism
SRR953582_primary_scf7180002190526_379-1119
Len: 740 bp
Hits: 20
E-val: 1.90E-138
Sim: 97.83%
 XP_016138641.1 SPRY domain-containing SOCS box protein 1-like
GO:0016567P:protein ubiquitination
GO:0035556P:intracellular signal transduction
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0005737C:cytoplasm
GO:0019005C:SCF ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180002191339_1-1436
Len: 1,435 bp
Hits: 20
E-val: 2.90E-29
Sim: 98.75%
 RXN06712.1E3 ubiquitin- ligase MYLIP
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0007369P:gastrulation
GO:0016567P:protein ubiquitination
GO:0004842F:ubiquitin-protein transferase activity
GO:0005515F:protein binding
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0005829C:cytosol
GO:0005856C:cytoskeleton
DNA Metabolism
SRR953582_primary_scf7180002191432_1-1647
Len: 1,646 bp
Hits: 20
E-val: 4.20E-93
Sim: 93.65%
 XP_018921264.1 septin-9-like isoform X1
GO:0003677F:DNA binding
GO:0005525F:GTP binding
GO:0008270F:zinc ion binding
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002192537_1-777
Len: 776 bp
Hits: 20
E-val: 1.30E-23
Sim: 76.12%
 XP_018957925.1 protein angel homolog 1-like isoform X3
GO:0000175F:3'-5'-RNA exonuclease activity
GO:0003730F:mRNA 3'-UTR binding
DNA Metabolism
SRR953582_primary_scf7180002192983_1-1601
Len: 1,600 bp
Hits: 20
E-val: 3.80E-107
Sim: 90.53%
 XP_018971439.1 nuclear factor 7, ovary-like
GO:0045087P:innate immune response
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002195610_70-471
Len: 401 bp
Hits: 20
E-val: 1.20E-38
Sim: 81.54%
 RXN15671.1zinc finger BED domain-containing 1-like protein
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
GO:0046983F:protein dimerization activity
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002196902_1-857
Len: 856 bp
Hits: 20
E-val: 2.60E-38
Sim: 100%
 XP_026098624.1roquin-1-like isoform X1
GO:0000209P:protein polyubiquitination
GO:0000288P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0003725F:double-stranded RNA binding
GO:0003729F:mRNA binding
GO:0008270F:zinc ion binding
GO:0035613F:RNA stem-loop binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000932C:P-body
GO:0010494C:cytoplasmic stress granule
DNA Metabolism
SRR953582_primary_scf7180002198514_1-998
Len: 997 bp
Hits: 20
E-val: 8.70E-17
Sim: 97.52%
 XP_026055920.1MICOS complex subunit mic25a isoform X1
GO:0006974P:DNA damage response
GO:0042407P:cristae formation
GO:0061617C:MICOS complex
DNA Metabolism
SRR953582_primary_scf7180002199381_1-821
Len: 820 bp
Hits: 20
E-val: 3.80E-18
Sim: 93.83%
 XP_016129321.1 E3 ubiquitin-protein ligase UBR2-like
GO:0016567P:protein ubiquitination
GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002199670_1-785
Len: 784 bp
Hits: 20
E-val: 1.30E-47
Sim: 94.47%
 XP_016405866.1 E3 ubiquitin-protein ligase HACE1-like
GO:0001947P:heart looping
GO:0003190P:atrioventricular valve formation
GO:0003208P:cardiac ventricle morphogenesis
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0007030P:Golgi organization
GO:0030334P:regulation of cell migration
GO:0061025P:membrane fusion
GO:0070936P:protein K48-linked ubiquitination
GO:1903427P:negative regulation of reactive oxygen species biosynthetic process
GO:0016874F:ligase activity
GO:0031267F:small GTPase binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000139C:Golgi membrane
GO:0005634C:nucleus
GO:0005783C:endoplasmic reticulum
GO:0032580C:Golgi cisterna membrane
DNA Metabolism
SRR953582_primary_scf7180002200157_709-1671
Len: 962 bp
Hits: 20
E-val: 1.40E-11
Sim: 93.5%
 XP_026071787.1HMG box-containing protein 4-like isoform X1
GO:0003677F:DNA binding
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002201022_1-1036
Len: 1,035 bp
Hits: 20
E-val: 2.40E-70
Sim: 69.65%
 XP_018949802.1 tripartite motif-containing protein 2-like
GO:0000209P:protein polyubiquitination
GO:0030099P:myeloid cell differentiation
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0060215P:primitive hemopoiesis
GO:0061630F:ubiquitin protein ligase activity
DNA Metabolism