Gene Function: DNA Metabolism

Functional and statistical data for significant genes

Download
Showing 1,023 results (Page 40 of 41)
GO Legend: Biological Process (P) Molecular Function (F) Cellular Component (C)
Sequence & Stats Description GO Annotations Gene Function
SRR953582_primary_scf7180002201037_616-1027
Len: 411 bp
Hits: 20
E-val: 3.30E-47
Sim: 97.57%
 XP_016359671.1 E3 ubiquitin-protein ligase TRIM62-like isoform X1
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002201119_1-1396
Len: 1,395 bp
Hits: 20
E-val: 2.30E-47
Sim: 67.38%
 XP_016387615.1 protein Jumonji-like isoform X1
GO:0006325P:chromatin organization
GO:0043229C:intracellular organelle
DNA Metabolism
SRR953582_primary_scf7180002201443_1-1184
Len: 1,183 bp
Hits: 20
E-val: 1.20E-44
Sim: 99.23%
 XP_018962119.1 LOW QUALITY PROTEIN: ubiquitin-protein ligase E3C-like
GO:0000209P:protein polyubiquitination
GO:0006511P:ubiquitin-dependent protein catabolic process
GO:0016874F:ligase activity
GO:0061630F:ubiquitin protein ligase activity
DNA Metabolism
SRR953582_primary_scf7180002202393_1-771
Len: 770 bp
Hits: 20
E-val: 7.70E-37
Sim: 97.01%
 XP_018980307.1 zinc finger MYM-type protein 4-like
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
DNA Metabolism
SRR953582_primary_scf7180002202912_1-1327
Len: 1,326 bp
Hits: 20
E-val: 1.20E-21
Sim: 95.29%
 XP_026061926.1ATP-dependent DNA helicase PIF1
GO:0000723P:telomere maintenance
GO:0001510P:RNA methylation
GO:0006281P:DNA repair
GO:0006310P:DNA recombination
GO:0003677F:DNA binding
GO:0003723F:RNA binding
GO:0005524F:ATP binding
GO:0008173F:RNA methyltransferase activity
GO:0009378F:four-way junction helicase activity
GO:0016887F:ATP hydrolysis activity
GO:0036121F:double-stranded DNA helicase activity
GO:0043139F:5'-3' DNA helicase activity
GO:0061749F:forked DNA-dependent helicase activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0005634C:nucleus
GO:0005739C:mitochondrion
DNA Metabolism
SRR953582_primary_scf7180002204927_1-805
Len: 804 bp
Hits: 20
E-val: 3.40E-27
Sim: 53.36%
 XP_018921434.1 mitochondrial ubiquitin ligase activator of NFKB 1
GO:0016567P:protein ubiquitination
GO:0004842F:ubiquitin-protein transferase activity
GO:0008270F:zinc ion binding
GO:0016740F:transferase activity
GO:0016874F:ligase activity
GO:0005739C:mitochondrion
GO:0005741C:mitochondrial outer membrane
DNA Metabolism
SRR953582_primary_scf7180002206394_286-937
Len: 651 bp
Hits: 20
E-val: 2.40E-47
Sim: 89.75%
 XP_016369922.1 tRNA-splicing endonuclease subunit Sen34-like
GO:0000379P:tRNA-type intron splice site recognition and cleavage
GO:0000213F:tRNA-intron lyase activity
GO:0003676F:nucleic acid binding
GO:0000214C:tRNA-intron endonuclease complex
DNA Metabolism
SRR953582_primary_scf7180002206663_379-1143
Len: 764 bp
Hits: 20
E-val: 2.80E-140
Sim: 84.46%
 XP_018923327.1 putative nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002209194_433-853
Len: 420 bp
Hits: 20
E-val: 1.50E-26
Sim: 99.65%
 XP_018953142.1 DCN1-like protein 2 isoform X1
GO:0045116P:protein neddylation
GO:0031624F:ubiquitin conjugating enzyme binding
GO:0032182F:ubiquitin-like protein binding
GO:0097602F:cullin family protein binding
GO:0000151C:ubiquitin ligase complex
DNA Metabolism
SRR953582_primary_scf7180002209497_1-589
Len: 588 bp
Hits: 20
E-val: 1.50E-21
Sim: 93.1%
 XP_026101373.1AN1-type zinc finger protein 3-like isoform X2
GO:0031018P:endocrine pancreas development
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
DNA Metabolism
SRR953582_primary_scf7180002212824_1-219
Len: 218 bp
Hits: 20
E-val: 2.20E-26
Sim: 66.97%
 XP_016418775.1 putative nuclease HARBI1
GO:0004518F:nuclease activity
GO:0046872F:metal ion binding
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002214655_1-692
Len: 691 bp
Hits: 20
E-val: 2.70E-25
Sim: 91.72%
 XP_016139258.1 regulator of G-protein signaling 21-like
GO:0000724P:double-strand break repair via homologous recombination
GO:0003684F:damaged DNA binding
GO:0003697F:single-stranded DNA binding
GO:0005524F:ATP binding
GO:0016887F:ATP hydrolysis activity
GO:0000781C:chromosome, telomeric region
GO:0005634C:nucleus
GO:0030915C:Smc5-Smc6 complex
GO:0035861C:site of double-strand break
DNA Metabolism
SRR953582_primary_scf7180002215162_1-771
Len: 770 bp
Hits: 20
E-val: 1.70E-44
Sim: 66.48%
 XP_016129299.1 probable ATP-dependent RNA helicase DDX59
GO:0003676F:nucleic acid binding
GO:0004386F:helicase activity
DNA Metabolism
SRR953582_primary_scf7180002220448_824-1057
Len: 233 bp
Hits: 20
E-val: 6.90E-26
Sim: 87.46%
 XP_018962989.1 LOW QUALITY PROTEIN: protein Jumonji-like
GO:0006338P:chromatin remodeling
GO:0010468P:regulation of gene expression
GO:0048863P:stem cell differentiation
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0046976F:histone H3K27 methyltransferase activity
GO:0000785C:chromatin
GO:0035098C:ESC/E(Z) complex
DNA Metabolism
SRR953582_primary_scf7180002220459_1-766
Len: 765 bp
Hits: 20
E-val: 2.40E-22
Sim: 100%
 XP_026128916.1chromodomain-helicase-DNA-binding protein 1-like isoform X1
GO:0034728P:nucleosome organization
GO:0003677F:DNA binding
GO:0003682F:chromatin binding
GO:0005524F:ATP binding
GO:0009378F:four-way junction helicase activity
GO:0016887F:ATP hydrolysis activity
GO:0036121F:double-stranded DNA helicase activity
GO:0042393F:histone binding
GO:0061749F:forked DNA-dependent helicase activity
GO:0140658F:ATP-dependent chromatin remodeler activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0000785C:chromatin
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002220829_1-714
Len: 713 bp
Hits: 20
E-val: 4.70E-49
Sim: 76.95%
 ROL51806.1RING finger protein 145
GO:0036503P:ERAD pathway
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0012505C:endomembrane system
GO:0016020C:membrane
DNA Metabolism
SRR953582_primary_scf7180002221407_1-1270
Len: 1,269 bp
Hits: 20
E-val: 6.30E-145
Sim: 94.45%
 XP_018950562.1 transcriptional regulator ATRX-like
GO:0006281P:DNA repair
GO:0006338P:chromatin remodeling
GO:0010468P:regulation of gene expression
GO:0010558P:negative regulation of macromolecule biosynthetic process
GO:0031297P:replication fork processing
GO:0005524F:ATP binding
GO:0008270F:zinc ion binding
GO:0009378F:four-way junction helicase activity
GO:0016787F:hydrolase activity
GO:0031490F:chromatin DNA binding
GO:0036121F:double-stranded DNA helicase activity
GO:0061749F:forked DNA-dependent helicase activity
GO:1990518F:single-stranded 3'-5' DNA helicase activity
GO:0000781C:chromosome, telomeric region
GO:0005634C:nucleus
GO:0005721C:pericentric heterochromatin
DNA Metabolism
SRR953582_primary_scf7180002222643_1-170
Len: 169 bp
Hits: 20
E-val: 2.00E-22
Sim: 100%
 ACO13698.1AN1-type zinc finger protein 5
GO:0003677F:DNA binding
GO:0008270F:zinc ion binding
DNA Metabolism
SRR953582_primary_scf7180002222655_469-1204
Len: 735 bp
Hits: 20
E-val: 6.80E-43
Sim: 95.38%
 XP_018951277.1 N-terminal Xaa-Pro-Lys N-methyltransferase 1-like
GO:0006338P:chromatin remodeling
GO:0007051P:spindle organization
GO:0007059P:chromosome segregation
GO:0018013P:N-terminal peptidyl-glycine methylation
GO:0018016P:N-terminal peptidyl-proline dimethylation
GO:0035572P:N-terminal peptidyl-serine dimethylation
GO:0035573P:N-terminal peptidyl-serine trimethylation
GO:0042054F:histone methyltransferase activity
GO:0071885F:N-terminal protein N-methyltransferase activity
GO:0005634C:nucleus
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002225227_1-1098
Len: 1,097 bp
Hits: 20
E-val: 1.10E-113
Sim: 96.64%
 XP_018961628.1 E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
GO:0045087P:innate immune response
GO:0008270F:zinc ion binding
GO:0016874F:ligase activity
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002227509_1-825
Len: 824 bp
Hits: 20
E-val: 4.50E-35
Sim: 81.21%
 XP_018955032.1 putative ATP-dependent RNA helicase TDRD12
GO:0042078P:germ-line stem cell division
GO:0004386F:helicase activity
GO:0005524F:ATP binding
GO:0016787F:hydrolase activity
DNA Metabolism
SRR953582_primary_scf7180002227618_1-793
Len: 792 bp
Hits: 20
E-val: 7.40E-27
Sim: 95.96%
 RXN25653.1HMG domain-containing 3 isoform X1
GO:0003677F:DNA binding
GO:0005634C:nucleus
DNA Metabolism
SRR953582_primary_scf7180002228058_185-1015
Len: 830 bp
Hits: 20
E-val: 2.10E-72
Sim: 69.36%
 XP_026145002.1chromodomain-helicase-DNA-binding protein 4-like isoform X2
GO:0006338P:chromatin remodeling
GO:0031101P:fin regeneration
GO:0003677F:DNA binding
GO:0003678F:DNA helicase activity
GO:0003682F:chromatin binding
GO:0016887F:ATP hydrolysis activity
GO:0042393F:histone binding
GO:0140658F:ATP-dependent chromatin remodeler activity
GO:0016581C:NuRD complex
DNA Metabolism
SRR953582_primary_scf7180002229840_457-861
Len: 404 bp
Hits: 20
E-val: 8.90E-45
Sim: 98.71%
 XP_026080272.1E3 ubiquitin-protein ligase UBR2-like isoform X3
GO:0016567P:protein ubiquitination
GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway
GO:0008270F:zinc ion binding
GO:0061630F:ubiquitin protein ligase activity
GO:0000151C:ubiquitin ligase complex
GO:0005737C:cytoplasm
DNA Metabolism
SRR953582_primary_scf7180002229934_291-942
Len: 651 bp
Hits: 20
E-val: 4.70E-27
Sim: 96.25%
 XP_018975287.1 ubiquitin-conjugating enzyme E2 variant 3-like
GO:0008333P:endosome to lysosome transport
GO:0015031P:protein transport
GO:0097039P:protein linear polyubiquitination
GO:0003676F:nucleic acid binding
GO:0008270F:zinc ion binding
GO:0036435F:K48-linked polyubiquitin modification-dependent protein binding
GO:0061630F:ubiquitin protein ligase activity
GO:0070530F:K63-linked polyubiquitin modification-dependent protein binding
GO:1990450F:linear polyubiquitin binding
GO:0000813C:ESCRT I complex
GO:0071797C:LUBAC complex
DNA Metabolism